RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 KDELR2P33947 212 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 CENPAP49450 140 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 SELENOWP63302 87 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 PGM2L1Q6PCE3 622 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 TMPRSS11FQ6ZWK6 438 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 MBOAT2Q6ZWT7 520 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 FAM90A1Q86YD7 464 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 OR8J3Q8NGG0 315 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 OR5R1Q8NH85 324 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 ACOT11Q8WXI4 607 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-228ENST00000629725 ADAT1Q9BUB4 502 aaKnown RBP16.54■□□□□ 0.24
TARDBP-228ENST00000629725 PPA2Q9H2U2 334 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 ONECUT1Q9UBC0 465 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 A0A087WUU8 490 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 RNASEK-C17orf49H0YIS7 233 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 GMDSO60547 372 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 LCATP04180 440 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 EEF1B2P24534 225 aaKnown RBP16.53■□□□□ 0.24
TARDBP-228ENST00000629725 GUCA2AQ02747 115 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 KRTAP27-1Q3LI81 207 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 GPR139Q6DWJ6 353 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 TBPL2Q6SJ96 375 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 MRPL21Q7Z2W9 205 aaKnown RBP16.53■□□□□ 0.24
TARDBP-228ENST00000629725 ADCK1Q86TW2 530 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 NAA40Q86UY6 237 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 C11orf44Q8N8P7 122 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 LZICQ8WZA0 190 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 NRIP3Q9NQ35 241 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 INTS9Q9NV88 658 aaKnown RBP16.53■□□□□ 0.24
TARDBP-228ENST00000629725 C1orf123Q9NWV4 160 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 KAAG1Q9UBP8 84 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 AURKCQ9UQB9 309 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 SNX13Q9Y5W8 968 aa16.53■□□□□ 0.24
TARDBP-228ENST00000629725 SOCS2O14508 198 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 FFAR1O14842 300 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 NDUFB2O95178 105 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 PAHP00439 452 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 DBPQ10586 325 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-228ENST00000629725 POU4F2Q12837 409 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 OXLD1Q5BKU9 147 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 PTCHD4Q6ZW05 846 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 RRM2BQ7LG56 351 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 CMTM4Q8IZR5 234 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 GCSAMQ8N6F7 178 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 SPERTQ8NA61 448 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 STON2Q8WXE9 905 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 TSSK2Q96PF2 358 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 PITX2Q99697 317 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 ATF6BQ99941 703 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 SIRT7Q9NRC8 400 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 NECAP2Q9NVZ3 263 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 FOXJ3Q9UPW0 622 aa16.52■□□□□ 0.24
TARDBP-228ENST00000629725 hCG_1807616A0A1W2PRN6 198 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 CD300LBA8K4G0 201 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 NPFFO15130 113 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 IFNW1P05000 195 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 GRPP07492 148 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 CRABP1P29762 137 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 MDH1P40925 334 aaKnown RBP16.51■□□□□ 0.23
TARDBP-228ENST00000629725 PRB3Q04118 309 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-228ENST00000629725 ECH1Q13011 328 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 C11orf88Q6PI97 169 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 DNM1P34Q6PK57 102 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 CFAP77Q6ZQR2 320 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 C1orf122Q6ZSJ8 110 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 ZNF826PQ6ZT77 177 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 FGFRL1Q8N441 504 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 LY6G5BQ8NDX9 201 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 CFHR4Q92496 578 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 SGCDQ92629 289 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 DNAJB11Q9UBS4 358 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 SIGLEC9Q9Y336 463 aa16.51■□□□□ 0.23
TARDBP-228ENST00000629725 IGHV3OR15-7A0A075B7D8 119 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 A0A1W2PRD5 423 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 A0A1W2PRF3 423 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 A0A1W2PRM7 423 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 A6NLC8 198 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 DCTN6O00399 190 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 PPP1R3DO95685 299 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 CDKN2AP42771 156 aaKnown RBP16.5■□□□□ 0.23
TARDBP-228ENST00000629725 EFNB2P52799 333 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 TRAP1Q12931 704 aaKnown RBP16.5■□□□□ 0.23
TARDBP-228ENST00000629725 VAX1Q5SQQ9 334 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 TEX36Q5VZQ5 186 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 VTCN1Q7Z7D3 282 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 LINC00346Q8IVM7 164 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 FAM46AQ96IP4 442 aaKnown RBP16.5■□□□□ 0.23
TARDBP-228ENST00000629725 DMRTB1Q96MA1 342 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 GPX7Q96SL4 187 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-228ENST00000629725 TOR3AQ9H497 397 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 AURKAIP1Q9NWT8 199 aaPredicted RBP16.5■□□□□ 0.23
TARDBP-228ENST00000629725 SIGLEC7Q9Y286 467 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 TMEM5Q9Y2B1 443 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 IER3IP1Q9Y5U9 82 aa16.5■□□□□ 0.23
TARDBP-228ENST00000629725 MEIOCA2RUB1 952 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 FXYD1O00168 92 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 XPNPEP2O43895 674 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 PTP4A3O75365 173 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 LHBP01229 141 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 GGT2P36268 569 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms