RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 NXF5Q9H1B4 397 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 DUSP15Q9H1R2 295 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 SYT4Q9H2B2 425 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR51I2Q9H344 312 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 TCEAL2Q9H3H9 227 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 AKTIPQ9H8T0 292 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 CALHM2Q9HA72 323 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ACKR4Q9NPB9 350 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 THYN1Q9P016 225 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF107Q9UII5 783 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 PILRBQ9UKJ0 227 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 FNDC3AQ9Y2H6 1198 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 MRPS28Q9Y2Q9 187 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 FCF1Q9Y324 198 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 FRYQ5TBA9 3013 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEM235A6NFC5 223 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 THY1P04216 161 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 P04436 131 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ANKRD34CP0C6C1 535 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 TIMP3P35625 211 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 GYG1P46976 350 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR3A4PP47883 348 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 POLR2HP52434 150 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 PSMA6P60900 246 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 CDK5Q00535 292 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF154Q13106 437 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF841Q6ZN19 808 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ESPNLQ6ZVH7 1005 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 DOLPP1Q86YN1 238 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 LAX1Q8IWV1 398 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 LRRC75A-AS1Q8N1F1 130 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC39A11Q8N1S5 342 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 CFAP52Q8N1V2 620 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 C19orf47Q8N9M1 422 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR2T12Q8NG77 320 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR2G3Q8NGZ4 309 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR5B3Q8NH48 314 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 Q8WTZ3 238 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEM159Q96B96 161 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 OR5B12Q96R08 314 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 MGLLQ99685 303 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 NRIP2Q9BQI9 281 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 H2AFJQ9BTM1 129 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 MAP1LC3CQ9BXW4 147 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 PRDM12Q9H4Q4 367 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 FNDC4Q9H6D8 234 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 RETNQ9HD89 108 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 SEMA4BQ9NPR2 832 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 GKN1Q9NS71 199 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 SMPXQ9UHP9 88 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 ST6GALNAC2Q9UJ37 374 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 SH2B3Q9UQQ2 575 aa3.51□□□□□ -1.85
R3HDM1-220ENST00000628915 DVL1O14640 695 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 DXOO77932 396 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 BCHEP06276 602 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 FOLR2P14207 255 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 MGMTP16455 207 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 NPPBP16860 134 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 NOVP48745 357 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 POLR2JP52435 117 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SHC2P98077 582 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 LGALSLQ3ZCW2 172 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SPIN4Q56A73 249 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 DMRTC1Q5HYR2 192 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 GSG1LQ6UXU4 331 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 DTWD1Q8N5C7 304 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC5A8Q8N695 610 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC6A18Q96N87 628 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 PITX2Q99697 317 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 ZBP1Q9H171 429 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 OR51J1Q9H342 316 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 TXNRD2Q9NNW7 524 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 C1orf123Q9NWV4 160 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 TAS2R8Q9NYW2 309 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 PIM2Q9P1W9 311 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEFF2Q9UIK5 374 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 POMT2Q9UKY4 750 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 YIPF1Q9Y548 306 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 LOC100509620A0A075B734 347 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 C7orf66A4D0T2 115 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SMIM9A6NGZ8 99 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 OTOL1A6NHN0 477 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF670-ZNF695F2Z2N8 137 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 K7EN84 100 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 MPC2O95563 127 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 ITGA5P08648 1049 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 ESDP10768 282 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 HGFP14210 728 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 IL2RBP14784 551 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SELEP16581 610 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 GPD1P21695 349 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 CDK2P24941 298 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SLC6A1P30531 599 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 GABRA5P31644 462 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 IL2RGP31785 369 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 PYCR1P32322 319 aa3.5□□□□□ -1.85
R3HDM1-220ENST00000628915 SNCAP37840 140 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms