RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 EEF1B2P24534 225 aaKnown RBP12.07□□□□□ -0.48
PNKP-218ENST00000625299 SDHAP31040 664 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 DLX1P56177 255 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 LOXL3P58215 753 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 ERICH5Q6P6B1 374 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 ZNF826PQ6ZT77 177 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 SGCDQ92629 289 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 ITPKCQ96DU7 683 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 TSSK2Q96PF2 358 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 VSX1Q9NZR4 365 aaPredicted RBP12.07□□□□□ -0.48
PNKP-218ENST00000625299 NOTCH3Q9UM47 2321 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 NOP16Q9Y3C1 178 aaKnown RBP12.07□□□□□ -0.48
PNKP-218ENST00000625299 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 A0A087WUU8 490 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 A0A1B0GW55 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 NPFFO15130 113 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 GPR37O15354 613 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 IFNW1P05000 195 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L2P0CJ85 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L3P0CJ86 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L4P0CJ87 422 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L5P0CJ88 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L6P0CJ89 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L7P0CJ90 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 KDELR2P33947 212 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 KLRD1Q13241 179 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
PNKP-218ENST00000625299 OXLD1Q5BKU9 147 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 HIST2H3PS2Q5TEC6 136 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4L9Q6RFH8 374 aaPredicted RBP12.06□□□□□ -0.48
PNKP-218ENST00000625299 CFAP77Q6ZQR2 320 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 PTCHD4Q6ZW05 846 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 MBOAT2Q6ZWT7 520 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 RRM2BQ7LG56 351 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 VTCN1Q7Z7D3 282 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 LYG1Q8N1E2 194 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 LNX2Q8N448 690 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 PNKDQ8N490 385 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 TSPEARQ8WU66 669 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DYDC1Q8WWB3 177 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 ACOT11Q8WXI4 607 aaPredicted RBP12.06□□□□□ -0.48
PNKP-218ENST00000625299 PPP1R14AQ96A00 147 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 FAM46AQ96IP4 442 aaKnown RBP12.06□□□□□ -0.48
PNKP-218ENST00000625299 SLC22A4Q9H015 551 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 DUX4Q9UBX2 424 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 FBLN5Q9UBX5 448 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 RAB21Q9UL25 225 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 AURKCQ9UQB9 309 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 IER3IP1Q9Y5U9 82 aa12.06□□□□□ -0.48
PNKP-218ENST00000625299 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 CD300LBA8K4G0 201 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 FFAR1O14842 300 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 NDUFB2O95178 105 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 GGT2P36268 569 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 SELENOWP63302 87 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 ELF3P78545 371 aaPredicted RBP12.05□□□□□ -0.48
PNKP-218ENST00000625299 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
PNKP-218ENST00000625299 KCNMB1Q16558 191 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 GPR139Q6DWJ6 353 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 TMPRSS11FQ6ZWK6 438 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 ADCK1Q86TW2 530 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 RNF113BQ8IZP6 322 aaKnown RBP12.05□□□□□ -0.48
PNKP-218ENST00000625299 CMTM4Q8IZR5 234 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 FAM156AQ8NDB6 213 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 OR5R1Q8NH85 324 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 ATF6BQ99941 703 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 NECAP2Q9NVZ3 263 aa12.05□□□□□ -0.48
PNKP-218ENST00000625299 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
PNKP-218ENST00000625299 MEIOCA2RUB1 952 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 RNASEK-C17orf49H0YIS7 233 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 FXYD1O00168 92 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 DCTN6O00399 190 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 GMDSO60547 372 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 CRABP1P29762 137 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 MDH1P40925 334 aaKnown RBP12.04□□□□□ -0.48
PNKP-218ENST00000625299 CDKN2AP42771 156 aaKnown RBP12.04□□□□□ -0.48
PNKP-218ENST00000625299 LY6EQ16553 131 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 SLC18B1Q6NT16 456 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 FAM216BQ8N7L0 139 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 OR4C13Q8NGP0 309 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 OR2AE1Q8NHA4 323 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 NPRL2Q8WTW4 380 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 CCL13Q99616 98 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 NRIP3Q9NQ35 241 aa12.04□□□□□ -0.48
PNKP-218ENST00000625299 FAM220BPB1ANY3 271 aa12.03□□□□□ -0.48
PNKP-218ENST00000625299 H3BUX3 64 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms