RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ACTG2P63267 376 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 MRPS34P82930 218 aaKnown RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 ACSM1Q08AH1 577 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ENDOGQ14249 297 aaKnown RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 CORO6Q6QEF8 472 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 TMPRSS11AQ6ZMR5 421 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 PLEKHG7Q6ZR37 379 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 SLC16A12Q6ZSM3 486 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 VASH1Q7L8A9 365 aaPredicted RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 SLC22A24Q8N4F4 322 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 MAPK1IP1LQ8NDC0 245 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ST7LQ8TDW4 575 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 C10orf105Q8TEF2 133 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 PELI1Q96FA3 418 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ZNF75AQ96N20 296 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 OR8B4Q96RC9 309 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ABHD6Q9BV23 337 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 FUNDC2Q9BWH2 189 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 RAB1BQ9H0U4 201 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 HEATR1Q9H583 2144 aaKnown RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 NOX3Q9HBY0 568 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ACOXLQ9NUZ1 547 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 TMEM38BQ9NVV0 291 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 SLCO1C1Q9NYB5 712 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 GRIP1Q9Y3R0 1128 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 CMAHPQ9Y471 501 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 SIRT4Q9Y6E7 314 aaPredicted RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 A0A096LNT2 108 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 PNMA8CA0A1B0GUJ8 204 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 PHYHO14832 338 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 CRLF1O75462 422 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 SERPINA5P05154 406 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 ERCC1P07992 297 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 ZNF35P13682 527 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 CD36P16671 472 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 CPEP16870 476 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 ZNF14P17017 642 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 MSR1P21757 451 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 NR4A1P22736 598 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 RGS6P49758 472 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 PDLIM4P50479 330 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 SGCAQ16586 387 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 CFAP77Q6ZQR2 320 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 SPATC1Q76KD6 591 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 DCXRQ7Z4W1 244 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 MYPOPQ86VE0 399 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 SKA3Q8IX90 412 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 ZNF454Q8N9F8 522 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 OR10S1Q8NGN2 331 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 THEM6Q8WUY1 208 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 SNX33Q8WV41 574 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 ISOC1Q96CN7 298 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 MAP6Q96JE9 813 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 DOK1Q99704 481 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
PNKP-217ENST00000625216 ZNF416Q9BWM5 594 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 FAM192AQ9GZU8 254 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 ZNF224Q9NZL3 707 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 NDUFA13Q9P0J0 144 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 CYB5R1Q9UHQ9 305 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 ENPP5Q9UJA9 477 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 POLR1DQ9Y2S0 133 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 TMEM14AQ9Y6G1 99 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 JMJD1CQ15652 2540 aa10.88□□□□□ -0.67
PNKP-217ENST00000625216 LOC390937A0A1W2PQ73 354 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 CCDC160A6NGH7 325 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 METTL15A6NJ78 407 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 CCRL2O00421 344 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 GABARAPO95166 117 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 GADD45AP24522 165 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 GLRXP35754 106 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 PSMB10P40306 273 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 RPS25P62851 125 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 BDH1Q02338 343 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 ROM1Q03395 351 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 EGR3Q06889 387 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 SNTB2Q13425 540 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 TPBGQ13641 420 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 LIPKQ5VXJ0 399 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 LRRN1Q6UXK5 716 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 ANKRD13BQ86YJ7 626 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 PHC2Q8IXK0 858 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 NEU4Q8WWR8 484 aaPredicted RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 ASB17Q8WXJ9 295 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 UFD1Q92890 307 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 RPL3LQ92901 407 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 MRPL48Q96GC5 212 aaKnown RBP10.87□□□□□ -0.67
PNKP-217ENST00000625216 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 SORCS2Q96PQ0 1159 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 C1orf198Q9H425 327 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 TRIM36Q9NQ86 728 aa10.87□□□□□ -0.67
PNKP-217ENST00000625216 BABAM2Q9NXR7 383 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms