RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 DGAT2Q96PD7 388 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 S1PR5Q9H228 398 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 UBQLN4Q9NRR5 601 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 CACNA1IQ9P0X4 2223 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
LDB3-209ENST00000623056 A6NCN8 305 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 TAAR5O14804 337 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 ZNF264O43296 627 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 MPZL1O95297 269 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 VSIG8P0DPA2 414 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 PI3P19957 117 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 BTG2P78543 158 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 ZP2Q05996 745 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 BIKQ13323 160 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 ERV3-1Q14264 604 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 HMGN3Q15651 99 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
LDB3-209ENST00000623056 NUP54Q7Z3B4 507 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 OR52N4Q8NGI2 321 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 TCTEX1D2Q8WW35 142 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 ELSPBP1Q96BH3 223 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 INTS12Q96CB8 462 aaKnown RBP12.58□□□□□ -0.4
LDB3-209ENST00000623056 IP6K3Q96PC2 410 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 OCSTAMPQ9BR26 566 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 PAPOLGQ9BWT3 736 aaKnown RBP12.58□□□□□ -0.4
LDB3-209ENST00000623056 SLC26A1Q9H2B4 701 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 OR52A1Q9UKL2 312 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 FREM3P0C091 2139 aa12.58□□□□□ -0.4
LDB3-209ENST00000623056 P2RY10O00398 339 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 ISG15P05161 165 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 CA3P07451 260 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 GLP1RP43220 463 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 S100A10P60903 97 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 RPL27P61353 136 aaKnown RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 SUPT4H1P63272 117 aaKnown RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 C12orf76Q8N812 135 aaPredicted RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 POC1AQ8NBT0 407 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 MRPL38Q96DV4 380 aaKnown RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 TMEM41AQ96HV5 264 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 C2orf50Q96LR7 162 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 METTL8Q9H825 291 aaKnown RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 C2orf74A8MZ97 194 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 SCDO00767 359 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 BPNT1O95861 308 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 PET100P0DJ07 73 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 HKR1P10072 659 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 DAOP14920 347 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 LAP3P28838 519 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 PPP1CAP62136 330 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 ZNF615Q8N8J6 731 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 FGGYQ96C11 551 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 SLC25A36Q96CQ1 311 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 VSX1Q9NZR4 365 aaPredicted RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 CLDN16Q9Y5I7 305 aa12.57□□□□□ -0.4
LDB3-209ENST00000623056 ARHGEF17Q96PE2 2063 aaPredicted RBP12.57□□□□□ -0.4
LDB3-209ENST00000623056 TRANK1O15050 2925 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 A0A0J9YY10 115 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 H0Y8X5 98 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 AP4M1O00189 453 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 WRBO00258 174 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 PLRG1O43660 514 aaKnown RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 ADH6P28332 368 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 FUT7Q11130 342 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 IL15RAQ13261 267 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 C9orf50Q5SZB4 431 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 PATE1Q8WXA2 126 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 SPSB2Q99619 263 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 ADAM19Q9H013 955 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 PTGES2Q9H7Z7 377 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 GSKIPQ9P0R6 139 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 TNRC18O15417 2968 aaPredicted RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 CEACAM18A8MTB9 384 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 M0R036 132 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 CST4P01036 141 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 RNH1P13489 461 aaKnown RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 HSD11B1P28845 292 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 GSK3AP49840 483 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 OR2B8PP59922 312 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 IGLV3-21P80748 117 aaPredicted RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 WDSUB1Q8N9V3 476 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 ASB16Q96NS5 453 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
LDB3-209ENST00000623056 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 RGCCQ9H4X1 137 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 FAM60AQ9NP50 221 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 PRTFDC1Q9NRG1 225 aa12.56□□□□□ -0.4
LDB3-209ENST00000623056 TRAV36DV7A0A075B6V5 113 aa12.55□□□□□ -0.4
LDB3-209ENST00000623056 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
LDB3-209ENST00000623056 SCGNO76038 276 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms