RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PHOSPHO2Q8TCD6 241 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 EDAQ92838 391 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 RNF126Q9BV68 326 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 METTL8Q9H825 291 aaKnown RBP14.04□□□□□ -0.16
NPHP4-211ENST00000622020 RAB22AQ9UL26 194 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 MEGF11A6BM72 1044 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 A8MVM7 634 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 FBXO24O75426 580 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 IFI6P09912 130 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 CBR1P16152 277 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 PNLIPRP2P54317 469 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 MICBQ29980 383 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 LPCAT3Q6P1A2 487 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF813Q6ZN06 617 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 Q6ZS52 159 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 ST7LQ8TDW4 575 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 FAM71F1Q96KD3 344 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF304Q9HCX3 659 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 PDE7BQ9NP56 450 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 ACKR4Q9NPB9 350 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 POLR1DQ9Y2S0 133 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 FRG2CA6NGY1 282 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF354AO60765 605 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 SPP1P10451 314 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 TPT1P13693 172 aaKnown RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 SLC6A8P48029 635 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 CUTCQ9NTM9 273 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 DXOO77932 396 aaKnown RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 KNG1P01042 644 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 TTRP02766 147 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 SFTPBP07988 381 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 RCC1P18754 421 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 CRABP1P29762 137 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF93P35789 620 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 POLR2HP52434 150 aaKnown RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 SLC26A5P58743 744 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 GLIPR1L1Q6UWM5 242 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 CLEC9AQ6UXN8 241 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 THRSPQ92748 146 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 CCNL2Q96S94 520 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 VSX1Q9NZR4 365 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 KLF2Q9Y5W3 355 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-211ENST00000622020 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
NPHP4-211ENST00000622020 NME2P22392 152 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 CAPZBP47756 277 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 OR3A4PP47883 348 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 SLC29A4Q7RTT9 530 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 SPAG16Q8N0X2 631 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 OR1M1Q8NGA1 313 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 SMIM3Q9BZL3 60 aa14.02□□□□□ -0.16
NPHP4-211ENST00000622020 MS4A18H0YCH9 400 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 SRSF10O75494 262 aaKnown RBP14.02□□□□□ -0.17
NPHP4-211ENST00000622020 IGKV3-11P04433 115 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 RIPPLY1Q0D2K3 151 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 PDZK1IP1Q13113 114 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 MS4A18Q3C1V0 323 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 TMEM244Q5VVB8 128 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 ZNF704Q6ZNC4 412 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-211ENST00000622020 ARL11Q969Q4 196 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 SLAMF6Q96DU3 332 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 KLHDC7BQ96G42 594 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 GPER1Q99527 375 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 FRYLO94915 3013 aa14.02□□□□□ -0.17
NPHP4-211ENST00000622020 DUS4LO95620 317 aaKnown RBP14.01□□□□□ -0.17
NPHP4-211ENST00000622020 CRYBA1P05813 215 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 FSTP19883 344 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 GLRA1P23415 457 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 BIDP55957 195 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 TLE3Q04726 772 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ARFRP1Q13795 201 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 C1orf100Q5SVJ3 147 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 KLHL24Q6TFL4 600 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ABHD12BQ7Z5M8 362 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-211ENST00000622020 OR10H5Q8NGA6 315 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ADAMTS18Q8TE60 1221 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 C11orf40Q8WZ69 217 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 FBXO17Q96EF6 278 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 PHYHIPLQ96FC7 376 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 OR10C1Q96KK4 312 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 PBOV1Q9GZY1 135 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 C5orf66Q9H5L9 145 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 FREM2Q5SZK8 3169 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 MYO7BQ6PIF6 2116 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 A0A0A6YYD4 124 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ARPC4-TTLL3A0A0A6YYG9 625 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ZNF205O95201 554 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 MT-ATP6P00846 226 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 RAB13P51153 203 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 FBXW4P57775 412 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 PLAC9Q5JTB6 97 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 DRAM2Q6UX65 266 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 CLEC18BQ6UXF7 455 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 OR5T2Q8NGG2 359 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 RNF141Q8WVD5 230 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 WWTR1Q9GZV5 400 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 SUSD2Q9UGT4 822 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 HS3ST3A1Q9Y663 406 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 HSPB2A8KAH6 182 aa14.01□□□□□ -0.17
NPHP4-211ENST00000622020 ALG1L2C9J202 215 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms