RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 EGR3Q06889 387 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 TNK1Q13470 666 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 IL18R1Q13478 541 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 PLEKHG7Q6ZR37 379 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF525Q8N782 197 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 OR10H4Q8NGA5 316 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 RNF166Q96A37 237 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 RHNO1Q9BSD3 238 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 NIPAL2Q9H841 368 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 MRPS18AQ9NVS2 196 aaKnown RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 MYRFQ9Y2G1 1151 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 N6AMT1Q9Y5N5 214 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 CR1P17927 2039 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 IQCF6A8MYZ5 107 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF670-ZNF695F2Z2N8 137 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 RRP9O43818 475 aaKnown RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 HPXP02790 462 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 ANXA2P07355 339 aaKnown RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 MFGE8Q08431 387 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 SPRNQ5BIV9 151 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 C6orf52Q5T4I8 152 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.19□□□□□ -0.46
CBWD3-217ENST00000621474 OR5AS1Q8N127 324 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 OR8B12Q8NGG6 310 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 Q96MT0 163 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 BRD7Q9NPI1 651 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 HSPE1-MOB4S4R3N1 261 aa12.19□□□□□ -0.46
CBWD3-217ENST00000621474 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 TIMM8AO60220 97 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF254O75437 659 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 IGHA1P01876 353 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 APOC1P02654 83 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 ADH4P08319 380 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 ATP6V1E1P36543 226 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 ZNF81P51508 661 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 MMP16P51512 607 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 CLEC12BQ2HXU8 276 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 BHLHE23Q8NDY6 225 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 SETD9Q8NE22 299 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 OR52H1Q8NGJ2 320 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 PPP1R14AQ96A00 147 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 Q96MF0 132 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 BARX1Q9HBU1 254 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-217ENST00000621474 G6PC2Q9NQR9 355 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-217ENST00000621474 IKZF2Q9UKS7 526 aa12.18□□□□□ -0.46
CBWD3-217ENST00000621474 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
CBWD3-217ENST00000621474 hCG_38984A0A1B0GV85 526 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 TMEM269A0A1B0GVZ9 245 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 TBX1O43435 398 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 XRCC2O43543 280 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 IGLV3-1P01715 115 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 RIDAP52758 137 aaKnown RBP12.17□□□□□ -0.46
CBWD3-217ENST00000621474 CCL8P80075 99 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 FAM3AP98173 230 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 RAB40BQ12829 278 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 MALLQ13021 153 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 CDK5R2Q13319 367 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 MOGQ16653 247 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 IZUMO2Q6UXV1 221 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 TGIF2LYQ8IUE0 185 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 C8orf59Q8N0T1 100 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-217ENST00000621474 OR8G5Q8NG78 346 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 SNX33Q8WV41 574 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 NEU4Q8WWR8 484 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-217ENST00000621474 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 NKIRAS2Q9NYR9 191 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 GPR160Q9UJ42 338 aa12.17□□□□□ -0.46
CBWD3-217ENST00000621474 RPL36Q9Y3U8 105 aaKnown RBP12.17□□□□□ -0.46
CBWD3-217ENST00000621474 DYSFO75923 2080 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 PLSCR5A0PG75 271 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 MLNRO43193 412 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 SPRY3O43610 288 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 LIPAP38571 399 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 ACTC1P68032 377 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 ACTA1P68133 377 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 LIPNQ5VXI9 398 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 MRPL21Q7Z2W9 205 aaKnown RBP12.16□□□□□ -0.46
CBWD3-217ENST00000621474 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-217ENST00000621474 ACBD7Q8N6N7 88 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 RORBQ92753 470 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 SLC30A2Q9BRI3 323 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 CYSLTR2Q9NS75 346 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 NUFIP1Q9UHK0 495 aaKnown RBP12.16□□□□□ -0.46
CBWD3-217ENST00000621474 ZANQ9Y493 2812 aa12.16□□□□□ -0.46
CBWD3-217ENST00000621474 IGHV4-30-2A0A087WSY4 118 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms