RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 S1PR3Q99500 378 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 EGLN1Q9GZT9 426 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR8G3PP0DMU2 310 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF140P52738 457 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ERVS71-1P61550 626 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SAXO2Q658L1 398 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 C11orf87Q6NUJ2 197 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 GLIPR1L1Q6UWM5 242 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 RTL10Q7L3V2 364 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM229BQ8NBD8 167 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 VN1R2Q8NFZ6 395 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ARRDC2Q8TBH0 407 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 DOK4Q8TEW6 326 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ARRDC3Q96B67 414 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 GPR78Q96P69 363 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 STACQ99469 402 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR2J1Q9GZK6 312 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 C7orf72A4D263 438 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 M0QYG6 137 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ALDOCP09972 364 aaKnown RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TAZQ16635 292 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 DEFB110Q30KQ9 67 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 PLAC9Q5JTB6 97 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 DRAM2Q6UX65 266 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR52R1Q8NGF1 315 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR52L2PQ8NGH6 319 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ADGRG7Q96K78 797 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 CHST6Q9GZX3 395 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 LINC00597Q9H2U6 94 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 NAT8BQ9UHF3 227 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 EMC9Q9Y3B6 208 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 CNIH1O95406 144 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SLC25A6P12236 298 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CDC34P49427 236 aaPredicted RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 EMP3P54852 163 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FOXO1Q12778 655 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 NRN1LQ496H8 165 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM128Q5BJH2 165 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ELFN2Q5R3F8 820 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 MRPL2Q5T653 305 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 Q6ZSR6 202 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 GDPD3Q7L5L3 318 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 BPIFA4PQ86YQ2 179 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CARFQ8N187 725 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ZPBPQ9BS86 351 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TEX101Q9BY14 249 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 MFRPQ9BY79 579 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PITPNC1Q9UKF7 332 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TRBV4-1A0A0J9YWV2 114 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 COX7A2P2O60397 106 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 COX6CP09669 75 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 C17orf67Q0P5P2 114 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LHX8Q68G74 356 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 C1orf210Q8IVY1 113 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF583Q96ND8 569 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SLC17A9Q9BYT1 436 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 RGPD2P0DJD1 1756 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 A0A0D9SEW6 157 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SERPINE3A8MV23 424 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 HCRTO43612 131 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CARD18P57730 90 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TBC1D28Q2M2D7 210 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 AMMECR1LQ6DCA0 310 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM88Q6PEY1 159 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LCN15Q6UWW0 184 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CYHR1Q6ZMK1 362 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 UTP4Q969X6 686 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LRFN3Q9BTN0 628 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 C1QTNF3Q9BXJ4 246 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 NAA50Q9GZZ1 169 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF71Q9NQZ8 489 aaPredicted RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 MARCH4Q9P2E8 410 aaPredicted RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 VDAC3Q9Y277 283 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 H3BNC9 293 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 M0QZ24 198 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PRRX1P54821 245 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PHLDA2Q53GA4 152 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LINC00696Q6ZRV3 163 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 PAAF1Q9BRP4 392 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 LHX3Q9UBR4 397 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 CDC42EP3Q9UKI2 254 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 HSD17B6O14756 317 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SH2D1BO14796 132 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 IVDP26440 423 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 ASCL1P50553 236 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FDX2Q6P4F2 183 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 RNASEKQ6P5S7 137 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 SMIM4Q8WVI0 70 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 H1FXQ92522 213 aaKnown RBP6.54□□□□□ -1.36
COLCA1-205ENST00000620864 MEGF10Q96KG7 1140 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FER1L6-AS2Q96M78 137 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 RAB40CQ96S21 281 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FOXQ1Q9C009 403 aa6.54□□□□□ -1.36
COLCA1-205ENST00000620864 FAM206AQ9NX38 181 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms