RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 SRA1Q9HD15 236 aaKnown RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 UBQLN4Q9NRR5 601 aa9.68□□□□□ -0.86
UPF3A-212ENST00000619079 THAP10Q9P2Z0 257 aaPredicted RBP9.68□□□□□ -0.86
UPF3A-212ENST00000619079 A0A087X0M5 115 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 A0A1B0GX30 115 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 A0A1W2PPE2 198 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 BTBD17A6NE02 478 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 H3BSH0 61 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 RAB27BO00194 218 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 B3GALT2O43825 422 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 NKX2-2O95096 273 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GPANK1O95872 356 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ARG1P05089 322 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 SLC35G6P0C7Q6 338 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 DAOP14920 347 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 NDUFA6P56556 154 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 RPS15AP62244 130 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GPR18Q14330 331 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 MOGAT2Q3SYC2 334 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TMEM52BQ4KMG9 183 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 C1orf100Q5SVJ3 147 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 HIST2H3PS2Q5TEC6 136 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TCEAL6Q6IPX3 200 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 CACUL1Q86Y37 369 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF610Q8N9Z0 462 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 UBAC2Q8NBM4 344 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TERB2Q8NHR7 220 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 OTOSQ8NHW6 89 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 NT5CQ8TCD5 201 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 PIGQQ9BRB3 760 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 NUDT16L1Q9BRJ7 211 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 EIF5A2Q9GZV4 153 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TM7SF3Q9NS93 570 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 LUZP4Q9P127 313 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GRHPRQ9UBQ7 328 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GDF2Q9UK05 429 aaPredicted RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ATG2BQ96BY7 2078 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 CEACAM18A8MTB9 384 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF587BE7ETH6 402 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 PPP1R2P9O14990 202 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 CDK3Q00526 305 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 SLC17A1Q14916 467 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 RSU1Q15404 277 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GXYLT1Q4G148 440 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 C14orf28Q4W4Y0 310 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ALG10Q5BKT4 473 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ASPHD2Q6ICH7 369 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF529Q6P280 563 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TAF8Q7Z7C8 310 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 JAGN1Q8N5M9 183 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 C19orf47Q8N9M1 422 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 OR10D4PQ8NGN7 298 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 CD300LFQ8TDQ1 290 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ASB5Q8WWX0 329 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 LIPHQ8WWY8 451 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF775Q96BV0 537 aaPredicted RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GALNT14Q96FL9 552 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TCTN2Q96GX1 697 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 YPEL4Q96NS1 127 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 C20orf24Q9BUV8 137 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 SLC26A1Q9H2B4 701 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 METTL8Q9H825 291 aaKnown RBP9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ELOVL3Q9HB03 270 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TAS2R4Q9NYW5 299 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 DOK5Q9P104 306 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 TP53TG5Q9Y2B4 290 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 HDGFL3Q9Y3E1 203 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 SPACA6W5XKT8 324 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 WDFY4Q6ZS81 3184 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 ZDBF2Q9HCK1 2354 aa9.67□□□□□ -0.86
UPF3A-212ENST00000619079 GMFGO60234 142 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 ADAP1O75689 374 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 NDUFB7P17568 137 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 CHATP28329 748 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 DNASE1L1P49184 302 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 CTXN1P60606 82 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 RPS23P62266 143 aaKnown RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 FOXO1Q12778 655 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 RAB32Q13637 225 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 MIDNQ504T8 468 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF574Q6ZN55 896 aaPredicted RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 GKN2Q86XP6 184 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 DMRTC2Q8IXT2 367 aaPredicted RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF679Q8IYX0 411 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 POC1AQ8NBT0 407 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 LFNGQ8NES3 379 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 CLDN23Q96B33 292 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 ARRDC3Q96B67 414 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 SLC25A44Q96H78 314 aaPredicted RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 UNKLQ9H9P5 680 aaKnown RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 CGGBP1Q9UFW8 167 aaPredicted RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
UPF3A-212ENST00000619079 MMP17Q9ULZ9 603 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 LRRK1Q38SD2 2015 aa9.66□□□□□ -0.86
UPF3A-212ENST00000619079 RPL36A-HNRNPH2H7BZ11 118 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms