RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF101Q8IZC7 436 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ZFP82Q8N141 532 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 AGBL5Q8NDL9 886 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 OR10H5Q8NGA6 315 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 OR4N2Q8NGD1 307 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 FOXN4Q96NZ1 517 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 SCGB3A2Q96PL1 93 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 GFI1Q99684 422 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 GP6Q9HCN6 339 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF346Q9UL40 294 aaKnown RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 HHLA2Q9UM44 414 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ICAM5Q9UMF0 924 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 U3KQA8 63 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 LNP1A1A4G5 178 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM235A6NFC5 223 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 OR4C45A6NMZ5 311 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 IMPA2O14732 288 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 PRKNO60260 465 aaPredicted RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 STK17BO94768 372 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 LYPD3O95274 346 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 RAB6AP20340 208 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 CASRP41180 1078 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ACAA2P42765 397 aaKnown RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 MECP2P51608 486 aaKnown RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ATP1B3P54709 279 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 FOXL2P58012 376 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 LYG2Q86SG7 212 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 CBLN2Q8IUK8 224 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 BAP18Q8IXM2 172 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 GALNT16Q8N428 558 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 OR10AC1Q8NH08 325 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 RGP1Q92546 391 aaPredicted RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 C4orf45Q96LM5 186 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 OCIAD1Q9NX40 245 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 GSKIPQ9P0R6 139 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF230Q9UIE0 474 aaPredicted RBP6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 TNFSF18Q9UNG2 199 aa6.26□□□□□ -1.41
SRGAP3-213ENST00000618999 HCRTR2O43614 444 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC16A7O60669 478 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF14P17017 642 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 OR3A2P47893 321 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 NR0B1P51843 470 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ARF1P84077 181 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 PMPCAQ10713 525 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 EIF2B1Q14232 305 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 NKAIN1Q4KMZ8 207 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 EMC4Q5J8M3 183 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 LRRTM1Q86UE6 522 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 FOXRED2Q8IWF2 684 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 LINC00528Q8N1L1 170 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ARHGEF39Q8N4T4 335 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF615Q8N8J6 731 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ELP5Q8TE02 316 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TMED6Q8WW62 240 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 MICU1Q9BPX6 476 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 KCNK15Q9H427 330 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM231Q9H6L2 316 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 CTSFQ9UBX1 484 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TUBD1Q9UJT1 453 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 CSAG2Q9Y5P2 127 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TRBV5-5A0A0J9YX44 114 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM272A0A1B0GTI8 110 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 IFNA4P05014 189 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 APEHP13798 732 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 PSMB6P28072 239 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TACR3P29371 465 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 IL12BP29460 328 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 MEOX2P50222 304 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 FBXW4P57775 412 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 OR7A5Q15622 319 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 WDR38Q5JTN6 314 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ATPAF1Q5TC12 328 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 MOB3CQ70IA8 216 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM200AQ86VY9 491 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 PUSL1Q8N0Z8 303 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 CLEC1AQ8NC01 280 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 OR51A4Q8NGJ6 313 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 LILRB1Q8NHL6 650 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 STT3BQ8TCJ2 826 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 GPX8Q8TED1 209 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 C3orf49Q96BT1 292 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 LOXL4Q96JB6 756 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 CCNL2Q96S94 520 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 OR10A5Q9H207 317 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 TAS2R4Q9NYW5 299 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 KCNG2Q9UJ96 466 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC22A13Q9Y226 551 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 MMACHCQ9Y4U1 282 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 SPEGQ15772 3267 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 RIF1Q5UIP0 2472 aaKnown RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 M0R036 132 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 NDUFA2O43678 99 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 SCGNO76038 276 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 AKR7A3O95154 331 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ITGB2P05107 769 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 KLK3P07288 261 aaPredicted RBP6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 HEXBP07686 556 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 PGAM2P15259 253 aa6.25□□□□□ -1.41
SRGAP3-213ENST00000618999 ADH6P28332 368 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms