RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TBX6O95947 436 aaPredicted RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 SSTP61278 116 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 SSX2Q16385 188 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 DCAF10Q5QP82 559 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 STAC2Q6ZMT1 411 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 CELF2-AS1Q8N7Q2 184 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 AICDAQ9GZX7 198 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 RIF1Q5UIP0 2472 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 IFITM5A6NNB3 132 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 TOR1AO14656 332 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 SULT1B1O43704 296 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ATG12O94817 140 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 CTLA4P16410 223 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 TGM4P49221 684 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 TNK1Q13470 666 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ZNF695Q8IW36 515 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ORAI1Q96D31 301 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 C1QTNF6Q9BXI9 259 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 A0A0U1RQK1 487 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 FADS1O60427 444 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 HLA-AP01891 365 aaKnown RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 NGFRP08138 427 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 ZNF121P58317 390 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 IGLV3-21P80748 117 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 SORDQ00796 357 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 CMTM1Q8IZ96 169 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 NPAP1Q9NZP6 1156 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 LUZP4Q9P127 313 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 LIPT2A6NK58 231 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 ZNF780AO75290 641 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 FBXO24O75426 580 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 SERPINE2P07093 398 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 PPP3CBP16298 524 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 NFYAP23511 347 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 CHATP28329 748 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 MLF1P58340 268 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 C11orf91Q3C1V1 193 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 MED30Q96HR3 178 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 C11orf54Q9H0W9 315 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 GPR173Q9NS66 373 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 EHFQ9NZC4 300 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 FRMPD3Q5JV73 1810 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 A0A0D9SG52 128 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 E9PI62 339 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TSPAN2O60636 221 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 RAB5CP51148 216 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 IKZF1Q13422 519 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 RFPL4BQ6ZWI9 263 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 OR10K1Q8NGX5 313 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TERB2Q8NHR7 220 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 PRSS27Q9BQR3 290 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 WFDC6Q9BQY6 131 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 SCN2AQ99250 2005 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 RAC2P15153 192 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 PPT1P50897 306 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 RAC3P60763 192 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 MGAT2Q10469 447 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 SSX1Q16384 188 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.43□□□□□ -0.42
CIITA-213ENST00000618327 OR4K15Q8NH41 348 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 SLCO5A1Q9H2Y9 848 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 HAO2Q9NYQ3 351 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TRAPPC4Q9Y296 219 aa12.43□□□□□ -0.42
CIITA-213ENST00000618327 TO15178 435 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 CHRM2P08172 466 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 FTH1P19P0C7X4 201 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 HOXA6P31267 233 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 FGF9P31371 208 aaPredicted RBP12.42□□□□□ -0.42
CIITA-213ENST00000618327 TAS2R46P59540 309 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 CREB3L2Q70SY1 520 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 SIAH3Q8IW03 269 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 OR5M9Q8NGP3 310 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 PTP4A1Q93096 173 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 MCHR2Q969V1 340 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 SLAMF9Q96A28 289 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 DDA1Q9BW61 102 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 KIF25Q9UIL4 384 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
CIITA-213ENST00000618327 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 PLPP2O43688 288 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 RBP2P50120 134 aa12.42□□□□□ -0.42
CIITA-213ENST00000618327 SLC25A30Q5SVS4 291 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms