RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 TRIM36Q9NQ86 728 aa15.04■□□□□ -0
TRAPPC3-209ENST00000616395 OR6C68A6NDL8 312 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 CCDC182A6NF36 153 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 VSTM5A8MXK1 200 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 H3BMQ9 156 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 COL8A2P25067 703 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 GUCA1AP43080 201 aaPredicted RBP15.03■□□□□ -0
TRAPPC3-209ENST00000616395 GLO1Q04760 184 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 ACSM1Q08AH1 577 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 TRAM1Q15629 374 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 TSTQ16762 297 aaKnown RBP15.03■□□□□ -0
TRAPPC3-209ENST00000616395 MESTQ5EB52 335 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 SLC16A9Q7RTY1 509 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 FAM220AQ7Z4H9 259 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 KCTD20Q7Z5Y7 419 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 LHFPL3Q86UP9 236 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 SLC35F2Q8IXU6 374 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 SNX33Q8WV41 574 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 C22orf15Q8WYQ4 148 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 ALG8Q9BVK2 526 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 TMPRSS13Q9BYE2 586 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 ADGRL4Q9HBW9 690 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 SRA1Q9HD15 236 aaKnown RBP15.03■□□□□ -0
TRAPPC3-209ENST00000616395 MED29Q9NX70 200 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 VSX1Q9NZR4 365 aaPredicted RBP15.03■□□□□ -0
TRAPPC3-209ENST00000616395 CRNNQ9UBG3 495 aaPredicted RBP15.03■□□□□ -0
TRAPPC3-209ENST00000616395 SSR3Q9UNL2 185 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 NBEAL2Q6ZNJ1 2754 aa15.03■□□□□ -0
TRAPPC3-209ENST00000616395 MS4A18H0YCH9 400 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 APOL3O95236 402 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 IGLV1-44P01699 117 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 IGHG1P01857 330 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 HLA-DQA2P01906 255 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 GYPBP06028 91 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 SELENOPP49908 381 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 GBX2P52951 348 aaPredicted RBP15.02■□□□□ -0
TRAPPC3-209ENST00000616395 CLRN1P58418 232 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 UBE2NP61088 152 aaKnown RBP15.02■□□□□ -0
TRAPPC3-209ENST00000616395 GPR50Q13585 617 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 MS4A18Q3C1V0 323 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 PLEKHG7Q6ZR37 379 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 SHFQ7M4L6 423 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 AAED1Q7RTV5 226 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 SYS1Q8N2H4 156 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 OR1K1Q8NGR3 316 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 ZNF519Q8TB69 540 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 ASB10Q8WXI3 467 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 COQ7Q99807 217 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 SF3B5Q9BWJ5 86 aaKnown RBP15.02■□□□□ -0
TRAPPC3-209ENST00000616395 HCAR1Q9BXC0 346 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 RERGLQ9H628 205 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 B3GAT1Q9P2W7 334 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 GSTK1Q9Y2Q3 226 aa15.02■□□□□ -0
TRAPPC3-209ENST00000616395 NOTCH1P46531 2555 aa15.02□□□□□ -0.01
TRAPPC3-209ENST00000616395 KHDRBS3O75525 346 aaKnown RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 HPXP02790 462 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 CELA3BP08861 270 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 MRPL3P09001 348 aaKnown RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 ZNF823P16415 610 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 C3orf36Q3SXR2 165 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 THEM4Q5T1C6 240 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 ZNF322Q6U7Q0 402 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 CREB3L2Q70SY1 520 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 MYPOPQ86VE0 399 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 NANPQ8TBE9 248 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 GATAD2BQ8WXI9 593 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 ASB17Q8WXJ9 295 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 BCL2L2Q92843 193 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 TMEM45BQ96B21 275 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 ALKBH3Q96Q83 286 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 OR5M11Q96RB7 305 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 INTS14Q96SY0 518 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 DDOQ99489 341 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 SYT4Q9H2B2 425 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 BABAM2Q9NXR7 383 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 CLEC2DQ9UHP7 191 aa15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 LSM2Q9Y333 95 aaKnown RBP15.01□□□□□ -0.01
TRAPPC3-209ENST00000616395 ARPC4-TTLL3A0A0A6YYG9 625 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 SLC22A23A1A5C7 686 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 OR6C65A6NJZ3 312 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 SLC16A7O60669 478 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 LIMS3P0CW19 117 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 LIMS4P0CW20 117 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 CLUP10909 449 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 CPEP16870 476 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 ACHEP22303 614 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 PAX7P23759 505 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 CLDN17P56750 224 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 TPBGQ13641 420 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 DGUOKQ16854 277 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 LINGO2Q7L985 606 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 ZBTB46Q86UZ6 589 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 SLC25A44Q96H78 314 aaPredicted RBP15□□□□□ -0.01
TRAPPC3-209ENST00000616395 DUX5Q96PT3 197 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 ZNF275Q9NSD4 429 aaPredicted RBP15□□□□□ -0.01
TRAPPC3-209ENST00000616395 LAMP5Q9UJQ1 280 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 STUB1Q9UNE7 303 aa15□□□□□ -0.01
TRAPPC3-209ENST00000616395 A0A096LPE4 126 aa14.99□□□□□ -0.01
TRAPPC3-209ENST00000616395 A0A0G2JMP0 313 aa14.99□□□□□ -0.01
TRAPPC3-209ENST00000616395 A0A0X1KG70 313 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms