RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NID1P14543 1247 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ERVFC1-1P60608 527 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 BTNL3Q6UXE8 466 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CD300LDQ6UXZ3 194 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 HIST3H2AQ7L7L0 130 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 COX18Q8N8Q8 333 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 B3GNT7Q8NFL0 401 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 OR9Q2Q8NGE9 314 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 OR5L2Q8NGL0 311 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 C16orf52Q8NHV5 167 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 RAB8BQ92930 207 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 HIST1H2ACQ93077 130 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 NTNG2Q96CW9 530 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 LCORQ96JN0 433 aaPredicted RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 ADGRG7Q96K78 797 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 TMEM56Q96MV1 263 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ATP6V0BQ99437 205 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 S100A13Q99584 98 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 UQCC1Q9NVA1 299 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 WDR45Q9Y484 360 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 KCNE3Q9Y6H6 103 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 TMEM56-RWDD3S4R434 201 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 V9GYS6 101 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 RP1P56715 2156 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 H7C417 338 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CSO75390 466 aaKnown RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 EPPINO95925 133 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 IFNA21P01568 189 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ARG1P05089 322 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 EPXP11678 715 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CEACAM1P13688 526 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 FABP4P15090 132 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ARF6P62330 175 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 EBPQ15125 230 aaKnown RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 SSX1Q16384 188 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 EXT1Q16394 746 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 FNDC7Q5VTL7 733 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 TMEM91Q6ZNR0 172 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CPEB2Q7Z5Q1 589 aaKnown RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 OR2Y1Q8NGV0 311 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ABHD3Q8WU67 409 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 UBE2FQ969M7 185 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 SLC25A28Q96A46 364 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 PRRC1Q96M27 445 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 AMBNQ9NP70 447 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 RPS10P5Q9NQ39 176 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 MAN2C1Q9NTJ4 1040 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 KLHL28Q9NXS3 571 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 MGAT4CQ9UBM8 478 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 COPS7AQ9UBW8 275 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 TESQ9UGI8 421 aaKnown RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 PADI1Q9ULC6 663 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CBLCQ9ULV8 474 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 A4GNTQ9UNA3 340 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 A0A1W2PPH5 198 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 PRAMEF25A6NGN4 478 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 IDSB3KWA1 339 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CCL25O15444 150 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 MPZP25189 248 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 CEBPDP49716 269 aaPredicted RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 EMP2P54851 167 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 JOSD1Q15040 202 aaPredicted RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 NSDHLQ15738 373 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 GLB1L2Q8IW92 636 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 OR13C8Q8NGS7 320 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 OR52P1PQ8NH57 321 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 MFRPQ9BY79 579 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 MSL2Q9HCI7 577 aa7.88□□□□□ -1.15
VPS11-206ENST00000614944 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.88□□□□□ -1.15
VPS11-206ENST00000614944 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 RPL36A-HNRNPH2H7BZ11 118 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 CRYGCP07315 174 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 APLNRP35414 380 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 WNT4P56705 351 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 PIN1Q13526 163 aaPredicted RBP7.87□□□□□ -1.15
VPS11-206ENST00000614944 HERPUD1Q15011 391 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 TMEM201Q5SNT2 666 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 KIRREL2Q6UWL6 708 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 TMEM179BQ7Z7N9 219 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 LYG1Q8N1E2 194 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 APH1BQ8WW43 257 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 RSPO3Q9BXY4 272 aaPredicted RBP7.87□□□□□ -1.15
VPS11-206ENST00000614944 WWTR1Q9GZV5 400 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 LAT2Q9GZY6 243 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 FXYD6Q9H0Q3 95 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 REEP1Q9H902 201 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 SLC22A31A6NKX4 558 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 KLF7O75840 302 aaPredicted RBP7.87□□□□□ -1.15
VPS11-206ENST00000614944 CCL4P13236 92 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 BRS3P32247 399 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 GABRA3P34903 492 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 AKR1C3P42330 323 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 PPIAP62937 165 aaKnown RBP7.87□□□□□ -1.15
VPS11-206ENST00000614944 ID2Q02363 134 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 ST3GAL4Q11206 333 aa7.87□□□□□ -1.15
VPS11-206ENST00000614944 EXOSC7Q15024 291 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms