RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 UBE2ZQ9H832 354 aaPredicted RBP15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 K7ESM1 405 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ANKRD16Q6P6B7 361 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 SLC38A6Q8IZM9 456 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 TMEM123Q8N131 208 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 NECAP1Q8NC96 275 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 SMIM4Q8WVI0 70 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 TMEM231Q9H6L2 316 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 PRRG2O14669 202 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ST8SIA5O15466 376 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 PTOV1Q86YD1 416 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 CHST6Q9GZX3 395 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 CRYM-AS1A6NIL9 109 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 RFPL4AA6NLU0 287 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 RFPL4AL1F8VTS6 287 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 LIMS3P0CW19 117 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 LIMS4P0CW20 117 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 RPA2P15927 270 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 SPNP16150 400 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 BTLAQ7Z6A9 289 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 PTDSS2Q9BVG9 487 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 PHF7Q9BWX1 381 aaPredicted RBP15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 PCED1AQ9H1Q7 454 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 R3HDMLQ9H3Y0 253 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ZNF768Q9H5H4 540 aaKnown RBP15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ARL2-SNX15V9GYD0 113 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ICOSLGO75144 302 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 UBE2MP61081 183 aaKnown RBP15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 OLIG3Q7RTU3 272 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ARRDC1Q8N5I2 433 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 SIGLEC11Q96RL6 698 aa15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 C6orf106Q9H6K1 298 aaPredicted RBP15.78■□□□□ 0.12
HMGXB3-206ENST00000613459 ANKUB1A6NFN9 424 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 LILRA5A6NI73 299 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 ZNF354AO60765 605 aaPredicted RBP15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 GUSBP08236 651 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 SCAND1P57086 179 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 TEX261Q6UWH6 196 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 Q6ZNB5 142 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 C16orf52Q8NHV5 167 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 CXorf58Q96LI9 332 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 TRAPPC4Q9Y296 219 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 U3KQ87 197 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 LAMA4Q16363 1823 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 UPK1AO00322 258 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 TPPP2P59282 170 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 TMEM268Q5VZI3 342 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 NCR3LG1Q68D85 454 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 PAQR6Q6TCH4 344 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 GALNT16Q8N428 558 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 NHLRC2Q8NBF2 726 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 PP6455Q8WZ26 134 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 ARHGDIGQ99819 225 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 ZNF391Q9UJN7 358 aa15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.12
HMGXB3-206ENST00000613459 TEX101Q9BY14 249 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 IL2RAP01589 272 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 FBP1P09467 338 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 GLRA1P23415 457 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 FUT6P51993 359 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 OR2B8PP59922 312 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 ELFN2Q5R3F8 820 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 ZBTB37Q5TC79 503 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 LCN15Q6UWW0 184 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 RTN4RL1Q86UN2 441 aaPredicted RBP15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 EMC6Q9BV81 110 aa15.77■□□□□ 0.11
HMGXB3-206ENST00000613459 FZD6O60353 706 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 SLC2A10O95528 541 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 OR5H8P0DN80 308 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 NOVA1P51513 510 aaKnown RBP15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 CLLU1Q5K131 121 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 PARM1Q6UWI2 310 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 ABI3BPQ7Z7G0 1075 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 LHX4Q969G2 390 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 IFT22Q9H7X7 185 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 CLCF1Q9UBD9 225 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 CRYAAP02489 173 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 CTSLP07711 333 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 GPR3P46089 330 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 CLDN15P56746 228 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 OR2W3Q7Z3T1 314 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 ZNRF4Q8WWF5 429 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 PINX1Q96BK5 328 aaKnown RBP15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 FLVCR2Q9UPI3 526 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 ARPC3O15145 178 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 SMIM7Q9BQ49 75 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 TGFBR1P36897 503 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 OR2T2Q6IF00 324 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 FBXW5Q969U6 566 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 FAM166BA8MTA8 275 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 EFSO43281 561 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 LRP3O75074 770 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 TOX4O94842 621 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 B3GALT4O96024 378 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 VAMP3Q15836 100 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 SPANXN5Q5MJ07 72 aa15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 YRDCQ86U90 279 aaKnown RBP15.76■□□□□ 0.11
HMGXB3-206ENST00000613459 OR10X1Q8NGY0 326 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms