RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SPIN3Q5JUX0 258 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ANKRD16Q6P6B7 361 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 HSD17B13Q7Z5P4 300 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 GID4Q8IVV7 300 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 CMTM4Q8IZR5 234 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 FNDC9Q8TBE3 224 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 TMED6Q8WW62 240 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 MIB2Q96AX9 1013 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 KCNJ15Q99712 375 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 USP9YO00507 2555 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 NDUFA2O43678 99 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 GUSBP08236 651 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 B4GALT1P15291 398 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 APLNRP35414 380 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 FABP6P51161 128 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 SLC25A24Q6NUK1 477 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 GRINAQ7Z429 371 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 ANKRD19PQ9H560 264 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 HINT3Q9NQE9 182 aaKnown RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 FLRT3Q9NZU0 649 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 KLF13Q9Y2Y9 288 aaPredicted RBP9.74□□□□□ -0.85
FAM3A-221ENST00000612856 OBSL1O75147 1896 aa9.74□□□□□ -0.85
FAM3A-221ENST00000612856 H7C1Q1 480 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 SELENOFO60613 162 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 ATP1B1P05026 303 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 BDKRB2P30411 391 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FZD5Q13467 585 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 EBPQ15125 230 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PRICKLE4Q2TBC4 344 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 WDR74Q6RFH5 385 aaPredicted RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 OR1S1Q8NH92 325 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FAM122AQ96E09 287 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 RHOVQ96L33 236 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF251Q9BRH9 671 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 C20orf141Q9NUB4 165 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 EMC9Q9Y3B6 208 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 VPS13AQ96RL7 3174 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PLSCR5A0PG75 271 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FBXO24O75426 580 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 HOXC4P09017 264 aaPredicted RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 G0S2P27469 103 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FOXK2Q01167 660 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 DCAF10Q5QP82 559 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 C3orf33Q6P1S2 294 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 TMEM200AQ86VY9 491 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MORN4Q8NDC4 146 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 OR51S1Q8NGJ8 323 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 OR13C9Q8NGT0 318 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 HGDQ93099 445 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 ANKRD9Q96BM1 317 aaPredicted RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 KCTD12Q96CX2 325 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 UNKLQ9H9P5 680 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PCOLCE2Q9UKZ9 415 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 SYT5O00445 386 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 AMY2AP04746 511 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FAM87AP0C7U9 286 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 CCL2P13500 99 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 RAB6AP20340 208 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MAGEA5P43359 124 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 RPS10P46783 165 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 ZNF117Q03924 483 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 TSPAN31Q12999 210 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MYBPHQ13203 477 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 ARHGAP11BQ3KRB8 267 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 DPPA2Q7Z7J5 298 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MRGPREQ86SM8 312 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 LDLRAD3Q86YD5 345 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 SLC35F2Q8IXU6 374 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FAM181AQ8N9Y4 354 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 DNAAF1Q8NEP3 725 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 GPR32P1Q8NGA4 272 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 OR4D11Q8NGI4 311 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 AKR7LQ8NHP1 331 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 NT5CQ8TCD5 201 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 CPT1CQ8TCG5 803 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 GPA33Q99795 319 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 SUCNR1Q9BXA5 334 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 RGCCQ9H4X1 137 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PLXND1Q9Y4D7 1925 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 TRAV36DV7A0A075B6V5 113 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 CCDC163A0A0D9SF12 145 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 CXorf51AA0A1B0GTR3 108 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MPIG6BO95866 241 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PRH1P02810 166 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 HIST1H1CP16403 213 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 AKR1C4P17516 323 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 GCH1P30793 250 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PRKAR1BP31321 381 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 MEOX1P50221 254 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 DAP3P51398 398 aaKnown RBP9.73□□□□□ -0.85
FAM3A-221ENST00000612856 S100A10P60903 97 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 PSG6Q00889 435 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 FMODQ06828 376 aa9.73□□□□□ -0.85
FAM3A-221ENST00000612856 RPL18Q07020 188 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms