RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 FCN3O75636 299 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 LCATP04180 440 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 MEP1BQ16820 701 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 CORO6Q6QEF8 472 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 COLCA1Q6ZS62 124 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 FAM122BQ7Z309 247 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 LYG1Q8N1E2 194 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 FAM156AQ8NDB6 213 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 LZICQ8WZA0 190 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 CFHR4Q92496 578 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 PHF21AQ96BD5 680 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 CLPTM1LQ96KA5 538 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 FNDC11Q9BVV2 318 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 RHCGQ9UBD6 479 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 LHFPL6Q9Y693 200 aa14.11□□□□□ -0.15
CSNK1E-215ENST00000612795 IGHV3OR15-7A0A075B7D8 119 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 H3BUX3 64 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 SOCS2O14508 198 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 ACSM4P0C7M7 580 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 SDHAP31040 664 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 SAA4P35542 130 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 YAP1P46937 504 aaKnown RBP14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 HIST1H3AP68431 136 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 POU4F2Q12837 409 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 KLRD1Q13241 179 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 TRAM2Q15035 370 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 KCNMB1Q16558 191 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 NSUN5P1Q3KNT7 163 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 ZBED5Q49AG3 693 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 CYBRD1Q53TN4 286 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 HIST2H3PS2Q5TEC6 136 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 ZNF730Q6ZMV8 503 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 ZNF826PQ6ZT77 177 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 HIST2H3AQ71DI3 136 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 OFCC1Q8IZS5 231 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 FGFRL1Q8N441 504 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 GCSAMQ8N6F7 178 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 PLPP7Q8NBV4 271 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 NUAK2Q9H093 628 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 NMNAT1Q9HAN9 279 aaPredicted RBP14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 KAAG1Q9UBP8 84 aa14.1□□□□□ -0.15
CSNK1E-215ENST00000612795 CDC42EP2O14613 210 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 IMPA2O14732 288 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 GMDSO60547 372 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 PTBP3O95758 552 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 MPIG6BO95866 241 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 GRPP07492 148 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 VSIG10L2P0DP72 767 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 KIR2DS4P43632 304 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 CYLC2Q14093 348 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 RABL3Q5HYI8 236 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 GPR139Q6DWJ6 353 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 ERICH5Q6P6B1 374 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 DNM1P34Q6PK57 102 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 ADCK1Q86TW2 530 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 CALHM3Q86XJ0 350 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 ACOT11Q8WXI4 607 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 PITX2Q99697 317 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 ATF6BQ99941 703 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 SH3GL1Q99961 368 aa14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 VSX1Q9NZR4 365 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-215ENST00000612795 A0A1B0GW55 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 CD300LBA8K4G0 201 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L2P0CJ85 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L3P0CJ86 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L4P0CJ87 422 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L5P0CJ88 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L6P0CJ89 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L7P0CJ90 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 ZNF26P17031 533 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 GGT2P36268 569 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DLX1P56177 255 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 ECH1Q13011 328 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 LY6EQ16553 131 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 TEX36Q5VZQ5 186 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4L9Q6RFH8 374 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 SLC36A1Q7Z2H8 476 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 LINC00346Q8IVM7 164 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 RNF113BQ8IZP6 322 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 PNKDQ8N490 385 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 LY6G5BQ8NDX9 201 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 PPP1R35Q8TAP8 253 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 PARD6BQ9BYG5 372 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 RANBP3Q9H6Z4 567 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 DUX4Q9UBX2 424 aa14.08□□□□□ -0.16
CSNK1E-215ENST00000612795 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 GGT3PA6NGU5 568 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 J3KTA2 159 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 FBXO24O75426 580 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 NDUFB2O95178 105 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 CRABP1P29762 137 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 MZT1Q08AG7 82 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 TRAP1Q12931 704 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 MICBQ29980 383 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 RSPO1Q2MKA7 263 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 KRTAP27-1Q3LI81 207 aa14.07□□□□□ -0.16
CSNK1E-215ENST00000612795 FOXB2Q5VYV0 432 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms