RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 KLHL24Q6TFL4 600 aa18.17■□□□□ 0.5
SSBP3-216ENST00000610401 PNLDC1Q8NA58 520 aaKnown RBP18.17■□□□□ 0.5
SSBP3-216ENST00000610401 PRAMEF26H0Y7S4 382 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 DDAH2O95865 285 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 SFTPDP35247 375 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 CLDN6P56747 220 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 OR1D5P58170 312 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 SVBPQ8N300 66 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 OR10Z1Q8NGY1 313 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ZNF519Q8TB69 540 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 TCTN2Q96GX1 697 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 SLC46A1Q96NT5 459 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 LAT2Q9GZY6 243 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ESRP2Q9H6T0 727 aaKnown RBP18.16■□□□□ 0.5
SSBP3-216ENST00000610401 DAOP14920 347 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ZNF20P17024 532 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 PDZK1IP1Q13113 114 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ELAVL1Q15717 326 aaKnown RBP18.16■□□□□ 0.5
SSBP3-216ENST00000610401 DRAM2Q6UX65 266 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ZNF721Q8TF20 911 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 C11orf40Q8WZ69 217 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ADIPOR1Q96A54 375 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 SLAMF6Q96DU3 332 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 PIGMQ9H3S5 423 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 LANCL2Q9NS86 450 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ZNF701Q9NV72 531 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-216ENST00000610401 C5orf63A6NC05 138 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 CD8AP01732 235 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 GIMD1P0DJR0 217 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 KLK2P20151 261 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 HSD11B1P28845 292 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 DHPSP49366 369 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-216ENST00000610401 NAA40Q86UY6 237 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 BAP18Q8IXM2 172 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 OR4A4PQ8NGN8 299 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ALX4Q9H161 411 aaPredicted RBP18.16■□□□□ 0.5
SSBP3-216ENST00000610401 COPS7AQ9UBW8 275 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 ZNF175Q9Y473 711 aa18.16■□□□□ 0.5
SSBP3-216ENST00000610401 SSX5O60225 188 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 CRHP06850 196 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 YPEL5P62699 121 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 RAB32Q13637 225 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 CCDC36Q8IYA8 594 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 MITD1Q8WV92 249 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 LIN37Q96GY3 246 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-216ENST00000610401 ARHGAP5-AS1Q96IT6 56 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 OR10C1Q96KK4 312 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 A8MVM7 634 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 SLC33A1O00400 549 aaPredicted RBP18.15■□□□□ 0.5
SSBP3-216ENST00000610401 RER1O15258 196 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 LRP3O75074 770 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 TTRP02766 147 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 CD80P33681 288 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 CAPZBP47756 277 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 PNLIPRP2P54317 469 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 HYAL1Q12794 435 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 PABPC1L2AQ5JQF8 200 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 SHEQ5VZ18 495 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 NUP54Q7Z3B4 507 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 PIK3IP1Q96FE7 263 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 COL6A3P12111 3177 aa18.15■□□□□ 0.5
SSBP3-216ENST00000610401 TO15178 435 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 CRYBA1P05813 215 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 SLC26A5P58743 744 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 SPAG16Q8N0X2 631 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 CNTNAP3BQ96NU0 1288 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 PBOV1Q9GZY1 135 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 ASPMQ8IZT6 3477 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 RAD51DO75771 328 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 IGFBP3P17936 291 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-216ENST00000610401 OR3A2P47893 321 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 POLR2HP52434 150 aaKnown RBP18.14■□□□□ 0.49
SSBP3-216ENST00000610401 CHAF1BQ13112 559 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 SHHQ15465 462 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 RPL7L1Q6DKI1 246 aaKnown RBP18.14■□□□□ 0.49
SSBP3-216ENST00000610401 BRICD5Q6PL45 260 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 OR1M1Q8NGA1 313 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 RNF126Q9BV68 326 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 ASH2LQ9UBL3 628 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 NBEAQ8NFP9 2946 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 OR5K4A6NMS3 321 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 MED6O75586 246 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 TPT1P13693 172 aaKnown RBP18.14■□□□□ 0.49
SSBP3-216ENST00000610401 CCDC157Q569K6 752 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 ISOC2Q96AB3 205 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 WWTR1Q9GZV5 400 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 CYB5R1Q9UHQ9 305 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 RAB22AQ9UL26 194 aa18.14■□□□□ 0.49
SSBP3-216ENST00000610401 MS4A18H0YCH9 400 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 CRABP1P29762 137 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 MS4A18Q3C1V0 323 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 PLAC9Q5JTB6 97 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 CLEC18BQ6UXF7 455 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 EIF4E3Q8N5X7 224 aaKnown RBP18.13■□□□□ 0.49
SSBP3-216ENST00000610401 RAB3CQ96E17 227 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 ZNF319Q9P2F9 582 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 RHBDD3Q9Y3P4 386 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 A0A0A6YYD4 124 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 RD3LP0DJH9 198 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 AMY2BP19961 511 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms