RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 IRF2P14316 349 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 CA6P23280 308 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 ANOS1P23352 680 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OTX1P32242 354 aaPredicted RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 PSMB10P40306 273 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 MTNR1AP48039 350 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 PITPNBP48739 271 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 HOXA4Q00056 320 aaPredicted RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 ZNF92Q03936 586 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SLC9A3R2Q15599 337 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR8G1Q15617 311 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SNAI3Q3KNW1 292 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 PRAMEF6Q5VXH4 476 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 WDR25Q64LD2 544 aaPredicted RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 ZNF770Q6IQ21 691 aaPredicted RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 RPL13AP3Q6NVV1 102 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 DCDC5Q6ZRR9 648 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 MRPL21Q7Z2W9 205 aaKnown RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 PIGWQ7Z7B1 504 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 DEFB107AQ8IZN7 70 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 LINC00471Q8N535 108 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 FITM2Q8N6M3 262 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SLC37A3Q8NCC5 494 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 C19orf18Q8NEA5 215 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 PROKR2Q8NFJ6 384 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR9Q2Q8NGE9 314 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR52L1Q8NGH7 329 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR51L1Q8NGJ5 315 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR4C15Q8NGM1 316 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR11L1Q8NGX0 322 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 OR2T4Q8NH00 348 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SPTSSAQ969W0 71 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SLC25A28Q96A46 364 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 ZNF799Q96GE5 643 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 NUDT16L1Q9BRJ7 211 aaKnown RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 BTBD10Q9BSF8 475 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 TRIM15Q9C019 465 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 SLC22A4Q9H015 551 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 CLN8Q9UBY8 286 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 LYVE1Q9Y5Y7 322 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 CDH10Q9Y6N8 788 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 GGT3PA6NGU5 568 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 TNFRSF11BO00300 401 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 ZNF593O00488 134 aaPredicted RBP6.34□□□□□ -1.39
CUX1-219ENST00000606749 PHYHO14832 338 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 PTBP3O95758 552 aaKnown RBP6.34□□□□□ -1.39
CUX1-219ENST00000606749 NPY4RP50391 375 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 FGF12P61328 243 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 IL13RA1P78552 427 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 PCK2Q16822 640 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 TEX30Q5JUR7 227 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 GLYATL3Q5SZD4 288 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 SFRP4Q6FHJ7 346 aaPredicted RBP6.34□□□□□ -1.39
CUX1-219ENST00000606749 C16orf87Q6PH81 154 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 LYPD4Q6UWN0 246 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 DRAM2Q6UX65 266 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 C16orf89Q6UX73 402 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 CYP2R1Q6VVX0 501 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 RASSF6Q6ZTQ3 369 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 DCXRQ7Z4W1 244 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 LNX2Q8N448 690 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 ZNF511Q8NB15 262 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 OR8D4Q8NGM9 314 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 OR9Q1Q8NGQ5 310 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 OR2AE1Q8NHA4 323 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 TAF15Q92804 592 aaKnown RBP eCLIP6.34□□□□□ -1.39
CUX1-219ENST00000606749 KCNJ15Q99712 375 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 TSSK6Q9BXA6 273 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 PRDM13Q9H4Q3 707 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 ZNF696Q9H7X3 374 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 FN3KRPQ9HA64 309 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 CENPMQ9NSP4 180 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 NDE1Q9NXR1 346 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 MRPL15Q9P015 296 aaKnown RBP6.34□□□□□ -1.39
CUX1-219ENST00000606749 ACTR3BQ9P1U1 418 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 RNF7Q9UBF6 113 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 ARL2BPQ9Y2Y0 163 aa6.34□□□□□ -1.39
CUX1-219ENST00000606749 NOP16Q9Y3C1 178 aaKnown RBP6.34□□□□□ -1.39
CUX1-219ENST00000606749 TRAV40A0A0B4J280 105 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 MDFIC2A0A1B0GVS7 189 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 TCRBV5S2A0A599 114 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 POM121CA8CG34 1229 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 C22orf46C9J442 243 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 C3orf80F5H4A9 247 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 LGALS8O00214 317 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 ENSAO43768 121 aaKnown RBP6.33□□□□□ -1.4
CUX1-219ENST00000606749 CCNB2O95067 398 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 LHBP01229 141 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 GYPBP06028 91 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 LIPFP07098 398 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 GRPP07492 148 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 SPARCP09486 303 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 CLUP10909 449 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 SLC2A1P11166 492 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 ATP6V1B2P21281 511 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 FMO3P31513 532 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 MAGEA2P43356 314 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms