RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ESRRGP62508 458 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 GRB2P62993 217 aaKnown RBP12.19□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF92Q03936 586 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 SLC3A1Q07837 685 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 KPNB1Q14974 876 aaKnown RBP12.19□□□□□ -0.46
TUBE1-208ENST00000604743 GLYATL3Q5SZD4 288 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 PEG10Q86TG7 708 aaKnown RBP12.19□□□□□ -0.46
TUBE1-208ENST00000604743 CENPNQ96H22 339 aaPredicted RBP12.19□□□□□ -0.46
TUBE1-208ENST00000604743 GAL3ST1Q99999 423 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 SLC30A2Q9BRI3 323 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 MARCH7Q9H992 704 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 TMEM106BQ9NUM4 274 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 CDC42EP3Q9UKI2 254 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 PPP1R3CQ9UQK1 317 aa12.19□□□□□ -0.46
TUBE1-208ENST00000604743 KIAA1324LA8MWY0 1029 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-208ENST00000604743 B4DSR2 109 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 MLNRO43193 412 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 PRKYO43930 277 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 LYNP07948 512 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 MRPL3P09001 348 aaKnown RBP12.18□□□□□ -0.46
TUBE1-208ENST00000604743 H2BFMP0C1H6 154 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 SBK2P0C263 348 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 EPHA2P29317 976 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 HCCSP53701 268 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 KRTAP21-3Q3LHN1 58 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 SLC35D3Q5M8T2 416 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 FAM120AOSQ5T036 256 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 KDM4DQ6B0I6 523 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 FAM57BQ71RH2 274 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 BCDIN3DQ7Z5W3 292 aaKnown RBP12.18□□□□□ -0.46
TUBE1-208ENST00000604743 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-208ENST00000604743 TCEANCQ8N8B7 351 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF420Q8TAQ5 688 aaPredicted RBP12.18□□□□□ -0.46
TUBE1-208ENST00000604743 RNF133Q8WVZ7 376 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 GABARAPL1Q9H0R8 117 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF665Q9H7R5 613 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 TMEM160Q9NX00 188 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 NPTNQ9Y639 398 aa12.18□□□□□ -0.46
TUBE1-208ENST00000604743 CD300LBA8K4G0 201 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 SLC2A5P22732 501 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 CA6P23280 308 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 SRP9P49458 86 aaKnown RBP12.17□□□□□ -0.46
TUBE1-208ENST00000604743 RAD23AP54725 363 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 ACTR3P61158 418 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 GFOD2Q3B7J2 385 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 MOGAT3Q86VF5 341 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 GLCCI1Q86VQ1 547 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-208ENST00000604743 RAB39BQ96DA2 213 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 TEAD3Q99594 435 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 CIB1Q99828 191 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 PKP2Q99959 881 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
TUBE1-208ENST00000604743 TOR3AQ9H497 397 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 GCM1Q9NP62 436 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 H2AFY2Q9P0M6 372 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-208ENST00000604743 LPAR3Q9UBY5 353 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 TMEFF2Q9UIK5 374 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-208ENST00000604743 LAMP5Q9UJQ1 280 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 KLHDC2Q9Y2U9 406 aa12.17□□□□□ -0.46
TUBE1-208ENST00000604743 DOCK11Q5JSL3 2073 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 CCDC182A6NF36 153 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 ZAR1LA6NP61 321 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 XRCC2O43543 280 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF205O95201 554 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 APOC1P02654 83 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 MSMBP08118 114 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 HNF1AP20823 631 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 POLR2IP36954 125 aaKnown RBP12.16□□□□□ -0.46
TUBE1-208ENST00000604743 OPRL1P41146 370 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 DVL1P1P54792 670 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF121P58317 390 aaPredicted RBP12.16□□□□□ -0.46
TUBE1-208ENST00000604743 OR8G1Q15617 311 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 TIGD6Q17RP2 521 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 LCN1P1Q5VSP4 162 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 SLX4IPQ5VYV7 408 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 LRRN1Q6UXK5 716 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 OR51F2Q8NH61 342 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 PGAM5Q96HS1 289 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 IL4I1Q96RQ9 567 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 TTTY10Q9BZA0 68 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 HIF1ANQ9NWT6 349 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 PCDHB10Q9UN67 800 aa12.16□□□□□ -0.46
TUBE1-208ENST00000604743 SVEP1Q4LDE5 3571 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 PSMD9O00233 223 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 CYB5R3P00387 301 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-208ENST00000604743 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 SRD5A1P18405 259 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 MMP16P51512 607 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 PRAMEF6Q5VXH4 476 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms