RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SLITRK2Q9H156 845 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 MYLK2Q9H1R3 596 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 MMADHCQ9H3L0 296 aaPredicted RBP10.95□□□□□ -0.66
RPS28-204ENST00000602140 TNFRSF19Q9NS68 423 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 RNF7Q9UBF6 113 aa10.95□□□□□ -0.66
RPS28-204ENST00000602140 CD300LBA8K4G0 201 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 SRRM5B3KS81 715 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ENSAO43768 121 aaKnown RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 ZNF823P16415 610 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 RRM2P31350 389 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 PYCR1P32322 319 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 MSX2P35548 267 aaPredicted RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 IFNGR2P38484 337 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 RPS27P42677 84 aaKnown RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 GSSP48637 474 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 NPY4RP50391 375 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ZNF92Q03936 586 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.94□□□□□ -0.66
RPS28-204ENST00000602140 SNAI3Q3KNW1 292 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ZNF620Q6ZNG0 422 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 SPTSSAQ969W0 71 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ELAC2Q9BQ52 826 aaKnown RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 PCGF1Q9BSM1 259 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ADAT1Q9BUB4 502 aaKnown RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 SLC22A4Q9H015 551 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 PRDM13Q9H4Q3 707 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 FN3KRPQ9HA64 309 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 ERVK-18Q9QC07 812 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 CTSZQ9UBR2 303 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 MAGEL2Q9UJ55 1249 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 KCNG2Q9UJ96 466 aa10.94□□□□□ -0.66
RPS28-204ENST00000602140 NOP16Q9Y3C1 178 aaKnown RBP10.94□□□□□ -0.66
RPS28-204ENST00000602140 C5orf63A6NC05 138 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 FAM181BA6NEQ2 426 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 GGT3PA6NGU5 568 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 TVP23AA6NH52 213 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 FABP3P05413 133 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 SFTPBP07988 381 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 ANOS1P23352 680 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 PRDX6P30041 224 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 BPIFB3P59826 476 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 TSPAN31Q12999 210 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 OR8B8Q15620 311 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 KCNJ8Q15842 424 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 CYB561A3Q8NBI2 242 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 PROKR2Q8NFJ6 384 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 OR2AE1Q8NHA4 323 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 NSMCE2Q96MF7 247 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 EGLN3Q9H6Z9 239 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 MARCH7Q9H992 704 aa10.93□□□□□ -0.66
RPS28-204ENST00000602140 ZNF879B4DU55 563 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 LGALS8O00214 317 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 ADAM20O43506 726 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 GMDSO60547 372 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 TOX4O94842 621 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 PTBP3O95758 552 aaKnown RBP10.92□□□□□ -0.66
RPS28-204ENST00000602140 CRYBA1P05813 215 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 LIPFP07098 398 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 HSD17B1P14061 328 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 CFHR2P36980 270 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 GLYATL3Q5SZD4 288 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 PGBD2Q6P3X8 592 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 FIP1L1Q6UN15 594 aaKnown RBP10.92□□□□□ -0.66
RPS28-204ENST00000602140 LYPD4Q6UWN0 246 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 DRAM2Q6UX65 266 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 Q6YL49 198 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 KIR3DL3Q8N743 410 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 PLPP7Q8NBV4 271 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 OR52L1Q8NGH7 329 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 OR51L1Q8NGJ5 315 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 OR2T4Q8NH00 348 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 DDOQ99489 341 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 IL1RAPQ9NPH3 570 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 NOX4Q9NPH5 578 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 KIF17Q9P2E2 1029 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 MMP24Q9Y5R2 645 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 DOCK11Q5JSL3 2073 aa10.92□□□□□ -0.66
RPS28-204ENST00000602140 TRAV38-1A0A0B4J264 116 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 OOEPA6NGQ2 149 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 P2RY10O00398 339 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 BHLHE40O14503 412 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 TNFRSF13BO14836 293 aaPredicted RBP10.91□□□□□ -0.66
RPS28-204ENST00000602140 ARPC2O15144 300 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 KNG1P01042 644 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 GYPAP02724 150 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 GRPP07492 148 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 PSKH1P11801 424 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 MMP9P14780 707 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
RPS28-204ENST00000602140 PRKXP51817 358 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 RAG2P55895 527 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 DEFA6Q01524 100 aa10.91□□□□□ -0.66
RPS28-204ENST00000602140 SRSF4Q08170 494 aaKnown RBP10.91□□□□□ -0.66
RPS28-204ENST00000602140 SAMD4BQ5PRF9 694 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms