RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 ST6GALNAC5Q9BVH7 336 aa16.37■□□□□ 0.21
UPF1-210ENST00000600689 SEC11CQ9BY50 192 aa16.37■□□□□ 0.21
UPF1-210ENST00000600689 GHRLQ9UBU3 117 aa16.37■□□□□ 0.21
UPF1-210ENST00000600689 LPAR3Q9UBY5 353 aa16.37■□□□□ 0.21
UPF1-210ENST00000600689 CARHSP1Q9Y2V2 147 aaKnown RBP16.37■□□□□ 0.21
UPF1-210ENST00000600689 PQLC2LA1A4F0 135 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 COLCA2A8K830 154 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 TMEM127O75204 238 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 OPN1LWP04000 364 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 CCINQ13939 588 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 ADAM5Q6NVV9 412 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 PPP1R3BQ86XI6 285 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 MIOXQ9UGB7 285 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 TEX13DA0A0J9YY54 714 aaPredicted RBP16.36■□□□□ 0.21
UPF1-210ENST00000600689 CLDN4O14493 209 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 SCGB1D2O95969 90 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 ARG1P05089 322 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 ZNF823P16415 610 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 DCDP81605 110 aaKnown RBP16.36■□□□□ 0.21
UPF1-210ENST00000600689 ZNF117Q03924 483 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 CATSPERDQ86XM0 798 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 NPRL2Q8WTW4 380 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 PMM1Q92871 262 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 NECAB3Q96P71 396 aaPredicted RBP16.36■□□□□ 0.21
UPF1-210ENST00000600689 IP6K3Q96PC2 410 aa16.36■□□□□ 0.21
UPF1-210ENST00000600689 MBTPS2O43462 519 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 DUS4LO95620 317 aaKnown RBP16.35■□□□□ 0.21
UPF1-210ENST00000600689 HOXC4P09017 264 aaPredicted RBP16.35■□□□□ 0.21
UPF1-210ENST00000600689 CLDN6P56747 220 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 FOXL2P58012 376 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 OR2A2Q6IF42 318 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 DHRS11Q6UWP2 260 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 ANGPTL5Q86XS5 388 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 SLC30A7Q8NEW0 376 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 SOX7Q9BT81 388 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 BCL2L14Q9BZR8 327 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 FBRSQ9HAH7 460 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 SLC17A5Q9NRA2 495 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 TMEM184BQ9Y519 407 aaPredicted RBP16.35■□□□□ 0.21
UPF1-210ENST00000600689 RP1P56715 2156 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 NDUFS6O75380 124 aaKnown RBP16.35■□□□□ 0.21
UPF1-210ENST00000600689 OR8U9P0C7N5 309 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 GLI4P10075 376 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 EMP2P54851 167 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 SSBP1Q04837 148 aaKnown RBP16.35■□□□□ 0.21
UPF1-210ENST00000600689 RAB30Q15771 203 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 CDCP2Q5VXM1 449 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 Q6ZS52 159 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 OR8U1Q8NH10 309 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 ASB13Q8WXK3 278 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 TCEAL3Q969E4 200 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 EMC6Q9BV81 110 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 SLCO5A1Q9H2Y9 848 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 AMDHD2Q9Y303 409 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
UPF1-210ENST00000600689 A0A1W2PPH5 198 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 B4DGG1 531 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 MELTFP08582 738 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 VSIG8P0DPA2 414 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 CLEC18BQ6UXF7 455 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 ADAT3Q96EY9 351 aaPredicted RBP16.34■□□□□ 0.21
UPF1-210ENST00000600689 NUDT22Q9BRQ3 303 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 TAF9BQ9HBM6 251 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 SOCS1O15524 211 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 NME2P1O60361 137 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 DRD1P21728 446 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 GLRA1P23415 457 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 ARFRP1Q13795 201 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 Q6ZRG5 221 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 TMEM104Q8NE00 496 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 OR52N5Q8NH56 324 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 AQP3Q92482 292 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 MED29Q9NX70 200 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 PHYHO14832 338 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 ZNF354AO60765 605 aaPredicted RBP16.34■□□□□ 0.21
UPF1-210ENST00000600689 ZNF205O95201 554 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 SEMA4FO95754 770 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 ZNF44P15621 663 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 PTAFRP25105 342 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 RPL27P61353 136 aaKnown RBP16.34■□□□□ 0.21
UPF1-210ENST00000600689 ZNF616Q08AN1 781 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 ANKRD55Q3KP44 614 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 NCMAPQ5T1S8 102 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 PNLDC1Q8NA58 520 aaKnown RBP16.34■□□□□ 0.21
UPF1-210ENST00000600689 C8orf44Q96CB5 159 aa16.34■□□□□ 0.21
UPF1-210ENST00000600689 SSX5O60225 188 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 H2BFMP0C1H6 154 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 ITGA3P26006 1051 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 CEBPGP53567 150 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 MISPQ8IVT2 679 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 TSLPQ969D9 159 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 CYP8B1Q9UNU6 501 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 WDR87Q6ZQQ6 2873 aa16.33■□□□□ 0.21
UPF1-210ENST00000600689 SPAG17Q6Q759 2223 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 IGKV1D-43A0A0B4J1Z2 117 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 SHISA7A6NL88 538 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 IL2RAP01589 272 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 IFNA4P05014 189 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 IGHV4-34P06331 123 aa16.33■□□□□ 0.2
UPF1-210ENST00000600689 AKT2P31751 481 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms