RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	MGLL	Q99685	303 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	C1QTNF5	Q9BXJ0	243 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	FAM206A	Q9NX38	181 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	SPEF1	Q9Y4P9	236 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	ITPR2	Q14571	2701 aa		18.92	■□□□□ 0.62
LTBP4-227	ENST00000600026	ANKRD17	O75179	2603 aa	Known RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026		E9PI62	339 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026		J3QW42	95 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	TBX1	O43435	398 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	SLC2A1	P11166	492 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	NR4A1	P22736	598 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	PSMB9	P28065	219 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	PCSK6	P29122	969 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	CCR9	P51686	369 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	GTF2A1	P52655	376 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	NKX6-1	P78426	367 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	MFGE8	Q08431	387 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	MLLT11	Q13015	90 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	SNTB2	Q13425	540 aa	Known RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	XAF1	Q6GPH4	301 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	NAA40	Q86UY6	237 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR52H1	Q8NGJ2	320 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR2G2	Q8NGZ5	317 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	LURAP1	Q96LR2	239 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	COG8	Q96MW5	612 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	PBOV1	Q9GZY1	135 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR10A2	Q9H208	303 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	LIME1	Q9H400	295 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	TBCCD1	Q9NVR7	557 aa		18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	NUFIP1	Q9UHK0	495 aa	Known RBP	18.91	■□□□□ 0.62
LTBP4-227	ENST00000600026	TRBV2	A0A0J9YWF9	115 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	OGG1	O15527	345 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	PNP	P00491	289 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	LALBA	P00709	142 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	JUNB	P17275	347 aa	Predicted RBP	18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	WNT5A	P41221	380 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	RAD52	P43351	418 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	TIGD6	Q17RP2	521 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	ARMCX4	Q5H9R4	360 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	ZNF611	Q8N823	705 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR5L1	Q8NGL2	311 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	UFD1	Q92890	307 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	DHRS9	Q9BPW9	319 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	OR51B6	Q9H340	312 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	G6PC2	Q9NQR9	355 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	CA10	Q9NS85	328 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	DSCAM	O60469	2012 aa		18.9	■□□□□ 0.62
LTBP4-227	ENST00000600026	PLCE1	Q9P212	2302 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	GPRIN2	O60269	458 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	ICMT	O60725	284 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	INMT	O95050	263 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	FAM157B	P0CG42	384 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	UCP2	P55851	309 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	MALL	Q13021	153 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	CDK5R1	Q15078	307 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	WDR38	Q5JTN6	314 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	VHLL	Q6RSH7	139 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	PAMR1	Q6UXH9	720 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	C20orf204	Q6ZNR8	217 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	COLCA1	Q6ZS62	124 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	PRSS45	Q7RTY3	260 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	C1orf174	Q8IYL3	243 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	ELMOD2	Q8IZ81	293 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	ABHD4	Q8TB40	342 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	MUL1	Q969V5	352 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	BCL2L14	Q9BZR8	327 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	COMMD4	Q9H0A8	199 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	ST6GALNAC2	Q9UJ37	374 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	ROS1	P08922	2347 aa		18.89	■□□□□ 0.61
LTBP4-227	ENST00000600026	XRCC2	O43543	280 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	SMPD2	O60906	423 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	CEL	P19835	753 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	THBS4	P35443	961 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	NANOS3	P60323	173 aa	Known RBP	18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	GPR50	Q13585	617 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	SYT6	Q5T7P8	510 aa	Predicted RBP	18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	RFPL4B	Q6ZWI9	263 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF101	Q8IZC7	436 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	PRSS35	Q8N3Z0	413 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF676	Q8N7Q3	588 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZFP41	Q8N8Y5	198 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR8B12	Q8NGG6	310 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR5AK2	Q8NH90	309 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	RNF166	Q96A37	237 aa	Predicted RBP	18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	SMIM19	Q96E16	107 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	OPALIN	Q96PE5	141 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF442	Q9H7R0	627 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	FRRS1L	Q9P0K9	344 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	SLC22A13	Q9Y226	551 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	CENPE	Q02224	2701 aa		18.88	■□□□□ 0.61
LTBP4-227	ENST00000600026	PNMA8C	A0A1B0GUJ8	204 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	TMEM212	A6NML5	194 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	ATE1	O95260	518 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	CD1A	P06126	327 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	DANCR	P0C864	163 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	UBC	P0CG48	685 aa	Known RBP	18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	TUBG1	P23258	451 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	GLRX	P35754	106 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	KIR3DL2	P43630	455 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	FABP6	P51161	128 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms