RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 IER3IP1Q9Y5U9 82 aa12.26□□□□□ -0.45
IRF3-223ENST00000599223 VWFP04275 2813 aa12.26□□□□□ -0.45
IRF3-223ENST00000599223 WNK1Q9H4A3 2382 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 IGLV1-36A0A0B4J1U3 117 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 SAC3D1A6NKF1 404 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 IQCF6A8MYZ5 107 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 J3QW42 95 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 DIRAS1O95057 198 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 PPP1R3DO95685 299 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 HLA-DPB1P04440 258 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 H1F0P07305 194 aaKnown RBP12.25□□□□□ -0.45
IRF3-223ENST00000599223 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
IRF3-223ENST00000599223 MAGEA2P43356 314 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 DGCR6Q14129 220 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 KCNMB1Q16558 191 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 KRTAP27-1Q3LI81 207 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 GPR139Q6DWJ6 353 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 ADCK1Q86TW2 530 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 C19orf18Q8NEA5 215 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 OR52E2Q8NGJ4 325 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
IRF3-223ENST00000599223 COG8Q96MW5 612 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 COQ7Q99807 217 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 CIB1Q99828 191 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 FUZQ9BT04 418 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 CDADC1Q9BWV3 514 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 MS4A7Q9GZW8 240 aaPredicted RBP12.25□□□□□ -0.45
IRF3-223ENST00000599223 REEP1Q9H902 201 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 ORC6Q9Y5N6 252 aa12.25□□□□□ -0.45
IRF3-223ENST00000599223 C22orf46C9J442 243 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 G3V2T6 193 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 TXNDC12O95881 172 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 PPIAL4GP0DN37 164 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 OMGP23515 440 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 NOTCH1P46531 2555 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 RGS6P49758 472 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 GNB2P62879 340 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 COX10Q12887 443 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 OR2T5Q6IEZ7 315 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 LYPD2Q6UXB3 125 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 BRD3OSQ6XYD6 125 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 LINC00346Q8IVM7 164 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 GALNT4Q8N4A0 578 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 OR13G1Q8NGZ3 307 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 OR2T29Q8NH02 315 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 SLC25A28Q96A46 364 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 DHRS1Q96LJ7 313 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 ZNF582Q96NG8 517 aaPredicted RBP12.24□□□□□ -0.45
IRF3-223ENST00000599223 OSBPL10Q9BXB5 764 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 OAZ3Q9UMX2 235 aa12.24□□□□□ -0.45
IRF3-223ENST00000599223 PITPNBP48739 271 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 SRP9P49458 86 aaKnown RBP12.23□□□□□ -0.45
IRF3-223ENST00000599223 AQP4P55087 323 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 MAB21L1Q13394 359 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 GK3PQ14409 553 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 ZNF181Q2M3W8 571 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 CLEC12AQ5QGZ9 265 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 PRAMEF6Q5VXH4 476 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 SLC27A4Q6P1M0 643 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 DPY19L2P2Q6ZN68 376 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 OR6V1Q8N148 313 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 CBR4Q8N4T8 237 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 OR5K1Q8NHB7 308 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 RAB40AQ8WXH6 277 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 NEIL1Q96FI4 390 aaPredicted RBP12.23□□□□□ -0.45
IRF3-223ENST00000599223 C7orf34Q96L11 122 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 NDEL1Q9GZM8 345 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 FN3KQ9H479 309 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 PNRC2Q9NPJ4 139 aaKnown RBP12.23□□□□□ -0.45
IRF3-223ENST00000599223 RAB26Q9ULW5 256 aa12.23□□□□□ -0.45
IRF3-223ENST00000599223 C5orf63A6NC05 138 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 UNC119BA6NIH7 251 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 HOXA3O43365 443 aaPredicted RBP12.22□□□□□ -0.45
IRF3-223ENST00000599223 FAM20BO75063 409 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 SEMG1P04279 462 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 ACSM4P0C7M7 580 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 PSKH1P11801 424 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 GATA4P43694 442 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 CENPAP49450 140 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 RAD23AP54725 363 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 SMIM11AP58511 58 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 IL13RA1P78552 427 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 SRSF4Q08170 494 aaKnown RBP12.22□□□□□ -0.45
IRF3-223ENST00000599223 GK2Q14410 553 aaPredicted RBP12.22□□□□□ -0.45
IRF3-223ENST00000599223 MPPED2Q15777 294 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 DEFB112Q30KQ8 113 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 SLC18B1Q6NT16 456 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 BTNL3Q6UXE8 466 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 TREML4Q6UXN2 200 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms