RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	HCAR1	Q9BXC0	346 aa		12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641	VIPAS39	Q9H9C1	493 aa		12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641	BEX1	Q9HBH7	125 aa		12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641	RPRD1B	Q9NQG5	326 aa	Known RBP	12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641	CYB5R1	Q9UHQ9	305 aa		12.53	□□□□□ -0.4
PRKD2-210	ENST00000597641		A0A0U1RQK1	487 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	CD300LB	A8K4G0	201 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	ZNF879	B4DU55	563 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	TOX4	O94842	621 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	PTBP3	O95758	552 aa	Known RBP	12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	RHCE	P18577	417 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	CRABP1	P29762	137 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	RPS6KA3	P51812	740 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	DLX1	P56177	255 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	RFX4	Q33E94	735 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	BRICD5	Q6PL45	260 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	ARPIN	Q7Z6K5	226 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	ZBTB46	Q86UZ6	589 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	CELF2-AS1	Q8N7Q2	184 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	SDR9C7	Q8NEX9	313 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR4F5	Q8NH21	305 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	LINC01006	Q8NI28	216 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	RP9	Q8TA86	221 aa	Known RBP	12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	WDFY2	Q96P53	400 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	ATF6B	Q99941	703 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	SEMA6A	Q9H2E6	1030 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR52D1	Q9H346	318 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	NOX4	Q9NPH5	578 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	RNF7	Q9UBF6	113 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	AURKC	Q9UQB9	309 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641		V9GYQ6	96 aa		12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	TET2	Q6N021	2002 aa	Predicted RBP	12.52	□□□□□ -0.41
PRKD2-210	ENST00000597641	IGHV3OR15-7	A0A075B7D8	119 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	LGALS8	O00214	317 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	ADAM20	O43506	726 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	GYPA	P02724	150 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	IRF2	P14316	349 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	PYCR1	P32322	319 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR8G1	Q15617	311 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	GLYATL3	Q5SZD4	288 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	C17orf107	Q6ZR85	190 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	PGAP1	Q75T13	922 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	CYP4Z1	Q86W10	505 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	FAM90A1	Q86YD7	464 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	PIP4P2	Q8N4L2	257 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	GCSAM	Q8N6F7	178 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR11L1	Q8NGX0	322 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	FANK1	Q8TC84	345 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	LHX4	Q969G2	390 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	CCT8L2	Q96SF2	557 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	DDO	Q99489	341 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	RBM4B	Q9BQ04	359 aa	Known RBP	12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	PPP1R3E	Q9H7J1	279 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	ABCD2	Q9UBJ2	740 aa		12.51	□□□□□ -0.41
PRKD2-210	ENST00000597641	IGHV1-69D	A0A0B4J2H0	117 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641		A0A1B0GUS0	222 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	TVP23A	A6NH52	213 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	P2RY10	O00398	339 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ARPC3	O15145	178 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	SLC22A2	O15244	555 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR10H3	O60404	316 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	GPR137B	O60478	399 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	TSPAN15	O95858	294 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	IGHV1-69	P01742	117 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	SEMG1	P04279	462 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	PROK1	P58294	105 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ARF6	P62330	175 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	SLC35F1	Q5T1Q4	408 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	HIST2H2BD	Q6DRA6	164 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	PGM2L1	Q6PCE3	622 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	WDR86	Q86TI4	376 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	C1QL4	Q86Z23	238 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	C11orf53	Q8IXP5	236 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	TMEM86B	Q8N661	226 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	RNF148	Q8N7C7	305 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	SPRYD4	Q8WW59	207 aa	Predicted RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ERGIC1	Q969X5	290 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	SEH1L	Q96EE3	360 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	HOPX	Q9BPY8	73 aa	Predicted RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	KCTD14	Q9BQ13	255 aa	Predicted RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ADAT1	Q9BUB4	502 aa	Known RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	NDEL1	Q9GZM8	345 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	ACOXL	Q9NUZ1	547 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	DCAF13	Q9NV06	445 aa	Known RBP	12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	MRGBP	Q9NV56	204 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	C1orf123	Q9NWV4	160 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	AP3M1	Q9Y2T2	418 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	RNF114	Q9Y508	228 aa		12.5	□□□□□ -0.41
PRKD2-210	ENST00000597641	OOEP	A6NGQ2	149 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641		M0R135	149 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	CRYBA1	P05813	215 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	SLC2A1	P11166	492 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	OTX1	P32242	354 aa	Predicted RBP	12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	IER3	P46695	156 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	NPY4R	P50391	375 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	NUDT2	P50583	147 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	BPIFB3	P59826	476 aa		12.49	□□□□□ -0.41
PRKD2-210	ENST00000597641	OR8B8	Q15620	311 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms