RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 RAC2P15153 192 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 SPI1P17947 270 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 PYCR1P32322 319 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 GGT2P36268 569 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 SLC6A9P48067 706 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 MMP16P51512 607 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 BTG1P62324 171 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 ESRRGP62508 458 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 GINS1Q14691 196 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 CORO6Q6QEF8 472 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 LRRC28Q86X40 367 aaPredicted RBP12.74□□□□□ -0.37
TGFB1-202ENST00000597453 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 OR10AD1Q8NGE0 317 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
TGFB1-202ENST00000597453 DVL3Q92997 716 aaPredicted RBP12.74□□□□□ -0.37
TGFB1-202ENST00000597453 COG8Q96MW5 612 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 MRPL22Q9NWU5 206 aaKnown RBP12.74□□□□□ -0.37
TGFB1-202ENST00000597453 DOCK11Q5JSL3 2073 aa12.74□□□□□ -0.37
TGFB1-202ENST00000597453 MGAM2Q2M2H8 2515 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 F5H0A9 414 aaPredicted RBP12.73□□□□□ -0.37
TGFB1-202ENST00000597453 TMEM178BH3BS89 294 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 SURF4O15260 269 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 HMGN1P05114 100 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 GYPBP06028 91 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF12P17014 697 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 PAICSP22234 425 aaKnown RBP12.73□□□□□ -0.37
TGFB1-202ENST00000597453 RGS6P49758 472 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 BLVRAP53004 296 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 CRISP1P54107 249 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 KLF17Q5JT82 389 aaPredicted RBP12.73□□□□□ -0.37
TGFB1-202ENST00000597453 KDM4DQ6B0I6 523 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 SLC18B1Q6NT16 456 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 FBXW12Q6X9E4 464 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 KLHL36Q8N4N3 616 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF420Q8TAQ5 688 aaPredicted RBP12.73□□□□□ -0.37
TGFB1-202ENST00000597453 ZNRF4Q8WWF5 429 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 SEMA6AQ9H2E6 1030 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 WDR76Q9H967 626 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 GCM1Q9NP62 436 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 CYB5R1Q9UHQ9 305 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 OAZ3Q9UMX2 235 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 POLR3KQ9Y2Y1 108 aaPredicted RBP12.73□□□□□ -0.37
TGFB1-202ENST00000597453 COMMD3-BMI1R4GMX3 469 aa12.73□□□□□ -0.37
TGFB1-202ENST00000597453 TRRAPQ9Y4A5 3859 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 IGHV3-64DA0A0J9YX35 117 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 FAM183AA6NL82 134 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 A8MXK9 166 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 H0YL77 283 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 J3QW42 95 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 CLUP10909 449 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF823P16415 610 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
TGFB1-202ENST00000597453 PRSS12P56730 875 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 UBA52P62987 128 aaKnown RBP12.72□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF154Q13106 437 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 RSPO1Q2MKA7 263 aaPredicted RBP12.72□□□□□ -0.37
TGFB1-202ENST00000597453 TUSC1Q2TAM9 212 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 LINC01590Q5TEZ4 76 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 CFAP77Q6ZQR2 320 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 LINC00346Q8IVM7 164 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 OR8G5Q8NG78 346 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 OR51L1Q8NGJ5 315 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 APOBEC3DQ96AK3 386 aaPredicted RBP12.72□□□□□ -0.37
TGFB1-202ENST00000597453 MEGF10Q96KG7 1140 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 COQ7Q99807 217 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 PKP2Q99959 881 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 HCAR1Q9BXC0 346 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 ENOPH1Q9UHY7 261 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 PPIAL4AQ9Y536 164 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
TGFB1-202ENST00000597453 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PRR23D1E9PI22 279 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 MLNRO43193 412 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 MITFO75030 526 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 ZNF205O95201 554 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PRR23D2P0DMB1 279 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 FPR2P25090 351 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 FMO3P31513 532 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 MDH2P40926 338 aaKnown RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PCK2Q16822 640 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 TMEM236Q5W0B7 351 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 LYPD4Q6UWN0 246 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 BCL6BQ8N143 479 aaPredicted RBP12.71□□□□□ -0.37
TGFB1-202ENST00000597453 SIGLECL1Q8N7X8 197 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 BHLHE23Q8NDY6 225 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 OR6K6Q8NGW6 343 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PLEKHA8Q96JA3 519 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 CIB1Q99828 191 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 PRRG3Q9BZD7 231 aa12.71□□□□□ -0.37
TGFB1-202ENST00000597453 MED20Q9H944 212 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms