RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 ALDH3B1P43353 468 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 KIR3DL2P43630 455 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 GTF2A1P52655 376 aaPredicted RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 CDH15P55291 814 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 NANOS3P60323 173 aaKnown RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 RBM48Q5RL73 367 aaKnown RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 XAF1Q6GPH4 301 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 OR2T2Q6IF00 324 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 ZNF544Q6NX49 715 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 OR5AS1Q8N127 324 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 PRSS35Q8N3Z0 413 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 IGFBPL1Q8WX77 278 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 GATAD2BQ8WXI9 593 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 TRAF4Q9BUZ4 470 aaPredicted RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 JAM3Q9BX67 310 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 PLK3Q9H4B4 646 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 DUSP21Q9H596 190 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 NIPAL2Q9H841 368 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 INPP5EQ9NRR6 644 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 TAAR3PQ9P1P4 343 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 TPRKBQ9Y3C4 175 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 SIRT4Q9Y6E7 314 aaPredicted RBP13.28□□□□□ -0.28
SMCO4-206ENST00000596676 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
SMCO4-206ENST00000596676 IRGMA1A4Y4 181 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 ATE1O95260 518 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 TTRP02766 147 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 CD53P19397 219 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 CDKN1AP38936 164 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 MAP2K4P45985 399 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 RPS23P62266 143 aaKnown RBP13.27□□□□□ -0.29
SMCO4-206ENST00000596676 CSNK2BP67870 215 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 TNK1Q13470 666 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 WDR38Q5JTN6 314 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 CATSPERDQ86XM0 798 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 ZNF485Q8NCK3 441 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 HAVCR1Q96D42 359 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 PPP1R3EQ9H7J1 279 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 SETXQ7Z333 2677 aaKnown RBP13.27□□□□□ -0.29
SMCO4-206ENST00000596676 PDZD2O15018 2839 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 USF3Q68DE3 2245 aa13.27□□□□□ -0.29
SMCO4-206ENST00000596676 IGLV3-9A0A075B6K5 115 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 P2RY10O00398 339 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 NDUFS7O75251 213 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 APOC1P02654 83 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 GCH1P30793 250 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 DCTDP32321 178 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 MMP16P51512 607 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 KLF3P57682 345 aaPredicted RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 MALLQ13021 153 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 IRF3Q14653 427 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 ZNF829Q3KNS6 432 aaPredicted RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 MBNL2Q5VZF2 373 aaKnown RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 PAMR1Q6UXH9 720 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 FAM220AQ7Z4H9 259 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 KLHL36Q8N4N3 616 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 BHLHE23Q8NDY6 225 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 OR5L1Q8NGL2 311 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 OR51E1Q8TCB6 317 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 MYDGFQ969H8 173 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 REEP6Q96HR9 211 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 OR10A2Q9H208 303 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 FRRS1LQ9P0K9 344 aa13.26□□□□□ -0.29
SMCO4-206ENST00000596676 PURGQ9UJV8 347 aaKnown RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 CAB39Q9Y376 341 aaPredicted RBP13.26□□□□□ -0.29
SMCO4-206ENST00000596676 A0A1W2PPW3 197 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 B9A039 149 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 LMX1BO60663 402 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 IGHV3-13P01766 116 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 TACSTD2P09758 323 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 NAT2P11245 290 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 MYL12AP19105 171 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 EEF1B2P24534 225 aaKnown RBP13.25□□□□□ -0.29
SMCO4-206ENST00000596676 RBMXP38159 391 aaKnown RBP13.25□□□□□ -0.29
SMCO4-206ENST00000596676 ACTA2P62736 377 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 ACTG2P63267 376 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 FAM3AP98173 230 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 EFNB3Q15768 340 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 TIGD6Q17RP2 521 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 BCL2L15Q5TBC7 163 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 AGAP6Q5VW22 663 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 C20orf204Q6ZNR8 217 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 Q6ZR03 302 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
SMCO4-206ENST00000596676 ELMOD2Q8IZ81 293 aa13.25□□□□□ -0.29
SMCO4-206ENST00000596676 SYS1Q8N2H4 156 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms