RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TACSTD2P09758 323 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC2A1P11166 492 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 HTR1FP30939 366 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 DDOSTP39656 456 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 GZMKP49863 264 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 POU4F2Q12837 409 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 TIGD6Q17RP2 521 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 SNAI3Q3KNW1 292 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 ZIK1Q3SY52 487 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 CYB5R2Q6BCY4 276 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 Q6ZR03 302 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 BCDIN3DQ7Z5W3 292 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 FAM81AQ8TBF8 368 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 HPS1Q92902 700 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 RAB1CQ92928 201 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 TIMD4Q96H15 378 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 PGAM5Q96HS1 289 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 AMELYQ99218 206 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC30A2Q9BRI3 323 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 OR10A2Q9H208 303 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 RGCCQ9H4X1 137 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 C8orf4Q9NR00 106 aa14.68□□□□□ -0.06
SHKBP1-212ENST00000596163 IGHV4-61A0A0C4DH41 118 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 ACOD1A6NK06 481 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 SNTNA6NMZ2 147 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 CLDN25C9JDP6 229 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF670-ZNF695F2Z2N8 137 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 IFNL4K9M1U5 179 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 CD5LO43866 347 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 RP2O75695 350 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 ATP6V1E1P36543 226 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 SRP9P49458 86 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF121P58317 390 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF92Q03936 586 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 GLYATL3Q5SZD4 288 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 MEDAGQ5VYS4 303 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 FAM57BQ71RH2 274 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 PEG10Q86TG7 708 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC35F2Q8IXU6 374 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 CCL17Q92583 94 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 DNAJC27Q9NZQ0 273 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 GMPPBQ9Y5P6 360 aa14.67□□□□□ -0.06
SHKBP1-212ENST00000596163 CD300LBA8K4G0 201 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 DCTDP32321 178 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 HCCSP53701 268 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 SNCBQ16143 134 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC25A30Q5SVS4 291 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 LRRN1Q6UXK5 716 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 Q71RC1 249 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF679Q8IYX0 411 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 OR2AE1Q8NHA4 323 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 SPSB4Q96A44 273 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 RDH12Q96NR8 316 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 SLC29A1Q99808 456 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 ADGRL4Q9HBW9 690 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 BRD7Q9NPI1 651 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 CLN6Q9NWW5 311 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF391Q9UJN7 358 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 IKZF2Q9UKS7 526 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 KLHDC2Q9Y2U9 406 aa14.66□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF469Q96JG9 3925 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 MPZL2O60487 215 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 GMDSO60547 372 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 LILRA1O75019 489 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 SBK2P0C263 348 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ANPEPP15144 967 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 RIDAP52758 137 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 PSMA6P60900 246 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 SNRPGP62308 76 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ROM1Q03395 351 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 MZT1Q08AG7 82 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF322Q6U7Q0 402 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 KLBQ86Z14 1044 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 SPERTQ8NA61 448 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ZNF555Q8NEP9 628 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 OR51G2Q8NGK0 314 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ITLN1Q8WWA0 313 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 ITFG2Q969R8 447 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 SGK3Q96BR1 496 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 REEP6Q96HR9 211 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 OR2V2Q96R30 315 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 OR8B4Q96RC9 309 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 PPP1R3CQ9UQK1 317 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 LRP12Q9Y561 859 aa14.65□□□□□ -0.06
SHKBP1-212ENST00000596163 A0A1B0GWJ7 208 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 ANKRD30BLA7E2S9 258 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 OR2T7P0C7T2 308 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 RIPPLY3P57055 190 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 CXCR4P61073 352 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 EGR3Q06889 387 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 RCN1Q15293 331 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 TRIP10Q15642 601 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 OCLNQ16625 522 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 ZNF829Q3KNS6 432 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 PRSS45Q7RTY3 260 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 FTMTQ8N4E7 242 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 CELF2-AS1Q8N7Q2 184 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms