RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IMPA2O14732 288 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TSPAN9O75954 239 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TOX4O94842 621 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TXNDC12O95881 172 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 SCG5P05408 212 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 GSSP48637 474 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 ERFP50548 548 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 RPS6KA3P51812 740 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 ENDOGQ14249 297 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 WDR25Q64LD2 544 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 C1orf94Q6P1W5 598 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 PGBD2Q6P3X8 592 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 GDPGP1Q6ZNW5 385 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 Q6ZTK2 550 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 PTCHD4Q6ZW05 846 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TRPM8Q7Z2W7 1104 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 ADCK1Q86TW2 530 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 OR8B3Q8NGG8 313 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 CCDC124Q96CT7 223 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 CLPTM1LQ96KA5 538 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 OR8B2Q96RD0 313 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TRIM15Q9C019 465 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 OR2H1Q9GZK4 316 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 WNT5BQ9H1J7 359 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 SYT4Q9H2B2 425 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 MAGIXQ9H6Y5 334 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 VSX1Q9NZR4 365 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 TMCC3Q9ULS5 477 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 FOXJ3Q9UPW0 622 aa11.37□□□□□ -0.59
SHKBP1-208ENST00000595726 IGHV1-69DA0A0B4J2H0 117 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 SOCS2O14508 198 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 KRT36O76013 467 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 PPP1R3DO95685 299 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 IGHV1-69P01742 117 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 MMP9P14780 707 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 IFNGR2P38484 337 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 HMGA2P52926 109 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 RFX4Q33E94 735 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 DHRS7BQ6IAN0 325 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 ZNF841Q6ZN19 808 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 OR9Q2Q8NGE9 314 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 OR4C15Q8NGM1 316 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 LHX4Q969G2 390 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 PHF21AQ96BD5 680 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 CMBLQ96DG6 245 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 C4orf45Q96LM5 186 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 BTBD10Q9BSF8 475 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 EMC7Q9NPA0 242 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
SHKBP1-208ENST00000595726 TNFRSF11BO00300 401 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 P2RY10O00398 339 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 ARPC3O15145 178 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 SLC16A7O60669 478 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 SLC6A6P31641 620 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 CDKN2AP42771 156 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 PCBD1P61457 104 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 TSPAN31Q12999 210 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 FOXB2Q5VYV0 432 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 SYT9Q86SS6 491 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 LDLRAD3Q86YD5 345 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 ATG16L2Q8NAA4 619 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 GNPDA2Q8TDQ7 276 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 WWC2-AS2Q96NR7 200 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 WDFY2Q96P53 400 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 ERMAPQ96PL5 475 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 THTPAQ9BU02 230 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 NUAK2Q9H093 628 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 VNN3Q9NY84 501 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 COA3Q9Y2R0 106 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 TIMM10BQ9Y5J6 103 aa11.35□□□□□ -0.59
SHKBP1-208ENST00000595726 C12orf71A8MTZ7 269 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ZNF879B4DU55 563 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 H3BSA7 217 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 K7EIL1 84 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 DCTN6O00399 190 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ACOT8O14734 319 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 SURF4O15260 269 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ICMTO60725 284 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 KHDRBS3O75525 346 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 CPT2P23786 658 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 PMELP40967 661 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ARHGDIAP52565 204 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 PPP1R8Q12972 351 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 OTPQ5XKR4 325 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ZNF770Q6IQ21 691 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 NLRC3Q7RTR2 1065 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 GLB1L2Q8IW92 636 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms