RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 OGFRL1Q5TC84 451 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 PLEKHG7Q6ZR37 379 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 Q71RC1 249 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 PGAP1Q75T13 922 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 OR10AD1Q8NGE0 317 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 ELMOD3Q96FG2 381 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 OR8B4Q96RC9 309 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 APOL4Q9BPW4 351 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 PIMREGQ9BSJ6 248 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 MYOZ1Q9NP98 299 aaPredicted RBP11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 CYSLTR2Q9NS75 346 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 IKZF2Q9UKS7 526 aa11.71□□□□□ -0.53
SHKBP1-207ENST00000595631 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.54
SHKBP1-207ENST00000595631 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
SHKBP1-207ENST00000595631 CASQ2O14958 399 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 SLC16A6O15403 523 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 MLNRO43193 412 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 RP2O75695 350 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 LIPAP38571 399 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 NR4A2P43354 598 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 PSMA6P60900 246 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 TNFAIP6P98066 277 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 MFGE8Q08431 387 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 OCLNQ16625 522 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 TIGD6Q17RP2 521 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 GFOD2Q3B7J2 385 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF322Q6U7Q0 402 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 OR8G5Q8NG78 346 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 OR10H4Q8NGA5 316 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 CYGBQ8WWM9 190 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 RDH5Q92781 318 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 DVL3Q92997 716 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 RFKQ969G6 155 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 SGK3Q96BR1 496 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 RNFT2Q96EX2 444 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 PGAM5Q96HS1 289 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 SAP30LQ9HAJ7 183 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 CLN6Q9NWW5 311 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 NKIRAS2Q9NYR9 191 aa11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-207ENST00000595631 IGHV4-61A0A0C4DH41 118 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 IGHV3-64DA0A0J9YX35 117 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 A0A1W2PQL4 384 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 GGT3PA6NGU5 568 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 CD300LBA8K4G0 201 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF670-ZNF695F2Z2N8 137 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 NDUFS8O00217 210 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 XRCC2O43543 280 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 LY6G6DO95868 133 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 HLA-DPB1P04440 258 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ADH4P08319 380 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 FOSL1P15407 271 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 SLC25A16P16260 332 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 GIFP27352 417 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ROM1Q03395 351 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 KRTAP1-1Q07627 177 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 RIN1Q13671 783 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ZMAT1Q5H9K5 638 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 FAM209AQ5JX71 171 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 KCTD18Q6PI47 426 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF679Q8IYX0 411 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 OR8B12Q8NGG6 310 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 RHOXF1Q8NHV9 184 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ITLN1Q8WWA0 313 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 NRG4Q8WWG1 115 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 PPP1R14AQ96A00 147 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 REEP6Q96HR9 211 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 RDH12Q96NR8 316 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 SLC30A2Q9BRI3 323 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 DCAF16Q9NXF7 216 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 ZDHHC8Q9ULC8 765 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 TMEM14AQ9Y6G1 99 aa11.69□□□□□ -0.54
SHKBP1-207ENST00000595631 IGHV1-69-2A0A0G2JMI3 117 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 LRP5LA4QPB2 252 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 F5H5P2 479 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 SRSF10O75494 262 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 PNPP00491 289 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 APOC1P02654 83 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 CD55P08174 381 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 SELEP16581 610 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ACHEP22303 614 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 CA6P23280 308 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms