RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR7A5Q15622 319 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 MIDNQ504T8 468 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 SPANXN2Q5MJ10 180 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 SLC22A25Q6T423 547 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 LYPD4Q6UWN0 246 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 NUFIP2Q7Z417 695 aaKnown RBP11.11□□□□□ -0.63
SCAF1-202ENST00000595242 CENPSQ8N2Z9 138 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 FAM216AQ8WUB2 273 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 SNX33Q8WV41 574 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 ADGRG7Q96K78 797 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 FOXN4Q96NZ1 517 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 KCNS3Q9BQ31 491 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 NPAP1Q9NZP6 1156 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 B9D1Q9UPM9 204 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 HDGFL3Q9Y3E1 203 aa11.11□□□□□ -0.63
SCAF1-202ENST00000595242 NBEAL2Q6ZNJ1 2754 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 CENPBD1B2RD01 187 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 H7C1C5 153 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 TNFSF11O14788 317 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 TMPRSS2O15393 492 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 UPK3AO75631 287 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 SERPINI2O75830 405 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 AKR7A3O95154 331 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 TACSTD2P09758 323 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF17P17021 662 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 ALOX5APP20292 161 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 CRABP1P29762 137 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 P2RY4P51582 365 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 RPS11P62280 158 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAF1-202ENST00000595242 LCN6P62502 163 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 PPP3R1P63098 170 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 MXD1Q05195 221 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 DDI2Q5TDH0 399 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 LYSMD2Q8IV50 215 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 TUSC5Q8IXB3 177 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 OTOSQ8NHW6 89 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 ACOT12Q8WYK0 555 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 GHSRQ92847 366 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
SCAF1-202ENST00000595242 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 INTS14Q96SY0 518 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 SDHCQ99643 169 aaPredicted RBP11.1□□□□□ -0.63
SCAF1-202ENST00000595242 ATF6BQ99941 703 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 SRA1Q9HD15 236 aaKnown RBP11.1□□□□□ -0.63
SCAF1-202ENST00000595242 ACOXLQ9NUZ1 547 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 GNG8Q9UK08 70 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 KLHDC2Q9Y2U9 406 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 GRIP1Q9Y3R0 1128 aa11.1□□□□□ -0.63
SCAF1-202ENST00000595242 LOC390937A0A1W2PQ73 354 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 ZNF814B7Z6K7 855 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 SMAD9O15198 467 aaKnown RBP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 LYZL6O75951 148 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 UCHL1P09936 223 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 AHCYP23526 432 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 EDNRAP25101 427 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 CALRP27797 417 aaKnown RBP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 SLC3A1Q07837 685 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 SPOCK1Q08629 439 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 INSL4Q14641 139 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 CARTPTQ16568 116 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 ACSM3Q53FZ2 586 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 TEX30Q5JUR7 227 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 HBMQ6B0K9 141 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 DNM1P34Q6PK57 102 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 METAP1DQ6UB28 335 aaPredicted RBP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 TMEM108Q6UXF1 575 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 FAM220AQ7Z4H9 259 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 OR6N2Q8NGY6 317 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 ABHD3Q8WU67 409 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 TPK1Q9H3S4 243 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 ZCCHC4Q9H5U6 513 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 METTL17Q9H7H0 456 aaPredicted RBP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 B3GAT1Q9P2W7 334 aa11.09□□□□□ -0.63
SCAF1-202ENST00000595242 MRM2Q9UI43 246 aaKnown RBP11.09□□□□□ -0.63
SCAF1-202ENST00000595242 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 TMEM127O75204 238 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 PMS2P2O95744 297 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 KRT8P05787 483 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 TFPIP10646 304 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 HLA-DOBP13765 273 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 CTLA4P16410 223 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 MYL9P24844 172 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ROM1Q03395 351 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 RIN1Q13671 783 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 MELKQ14680 651 aa11.08□□□□□ -0.64
SCAF1-202ENST00000595242 RNPS1Q15287 305 aaKnown RBP11.08□□□□□ -0.64
SCAF1-202ENST00000595242 ZNF79Q15937 498 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms