RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 GCDHQ92947 438 aaPredicted RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ZMYND19Q96E35 227 aaPredicted RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 MAP6Q96JE9 813 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 COG8Q96MW5 612 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 SLC6A7Q99884 636 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ATF6BQ99941 703 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 PNRC2Q9NPJ4 139 aaKnown RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 TUBG2Q9NRH3 451 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 DDX28Q9NUL7 540 aaKnown RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 UBAP1Q9NZ09 502 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 A0A0G2JMP0 313 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 A0A0X1KG70 313 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 ISPDA4D126 451 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 MT-ND5P03915 603 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 DBHP09172 617 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 PSKH1P11801 424 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 EGR1P18146 543 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 SLC2A5P22732 501 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 ZFP36P26651 326 aaKnown RBP10.55□□□□□ -0.72
UPF1-203ENST00000594504 RPS7P62081 194 aaKnown RBP10.55□□□□□ -0.72
UPF1-203ENST00000594504 EFNB1P98172 346 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 APOFQ13790 326 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 LCN1P1Q5VSP4 162 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 MBNL2Q5VZF2 373 aaKnown RBP10.55□□□□□ -0.72
UPF1-203ENST00000594504 ZBTB49Q6ZSB9 765 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 SHFQ7M4L6 423 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 C1QL2Q7Z5L3 287 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 TIGD4Q8IY51 512 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 C3orf56Q8N813 242 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 TCEANCQ8N8B7 351 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 OR4M2Q8NGB6 313 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 TMEM163Q8TC26 289 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 FAM216AQ8WUB2 273 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 EME1Q96AY2 570 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 ELMOD3Q96FG2 381 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 TIMD4Q96H15 378 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 GAL3ST1Q99999 423 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 POFUT1Q9H488 388 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 C7orf69Q9H7B7 122 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 ESM1Q9NQ30 184 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
UPF1-203ENST00000594504 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 PLSCR5A0PG75 271 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 ERICH4A6NGS2 130 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 ZNF878C9JN71 531 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 F5H5K5 113 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 M0R129 80 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 SBK2P0C263 348 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 COMPP49747 757 aaPredicted RBP10.54□□□□□ -0.72
UPF1-203ENST00000594504 CDC42P60953 191 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 RCN1Q15293 331 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
UPF1-203ENST00000594504 NXNL2Q5VZ03 156 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 COLCA1Q6ZS62 124 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 USP43Q70EL4 1123 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 DPY19L4Q7Z388 723 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 ZDHHC22Q8N966 263 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 OR5L1Q8NGL2 311 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 NANPQ8TBE9 248 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 ST7LQ8TDW4 575 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 SPTSSAQ969W0 71 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 APOBEC3DQ96AK3 386 aaPredicted RBP10.54□□□□□ -0.72
UPF1-203ENST00000594504 SLAMF6Q96DU3 332 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 IL4I1Q96RQ9 567 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 TEAD3Q99594 435 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 MMP26Q9NRE1 261 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 H2AFY2Q9P0M6 372 aaPredicted RBP10.54□□□□□ -0.72
UPF1-203ENST00000594504 PPIAL4AQ9Y536 164 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
UPF1-203ENST00000594504 CCDC182A6NF36 153 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 SLC22A31A6NKX4 558 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 M0R135 149 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 WIPF1O43516 503 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 SPRY1O43609 319 aaPredicted RBP10.53□□□□□ -0.72
UPF1-203ENST00000594504 SELENOFO60613 162 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 ACSM4P0C7M7 580 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
UPF1-203ENST00000594504 SLC15A1P46059 708 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 TPTEP56180 551 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 PSG7Q13046 419 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
UPF1-203ENST00000594504 FAM209AQ5JX71 171 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 AADACL4Q5VUY2 407 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 RHOUQ7L0Q8 258 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 MEPCEQ7L2J0 689 aaKnown RBP10.53□□□□□ -0.72
UPF1-203ENST00000594504 GID4Q8IVV7 300 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 OTOSQ8NHW6 89 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 RNF133Q8WVZ7 376 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 ZNF799Q96GE5 643 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 HRASLS5Q96KN8 279 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 SLC29A1Q99808 456 aa10.53□□□□□ -0.72
UPF1-203ENST00000594504 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms