RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 FAM214BQ7L5A3 538 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 KRT74Q7RTS7 529 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SLC22A24Q8N4F4 322 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 DUSP18Q8NEJ0 188 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 GJC3Q8NFK1 279 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 ST6GAL2Q96JF0 529 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 C4orf45Q96LM5 186 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 ZFP3Q96NJ6 502 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 COMMD4Q9H0A8 199 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 TCF7L1Q9HCS4 588 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 GTF2A1LQ9UNN4 478 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 ALG5Q9Y673 324 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
VRK3-205ENST00000593919 KALRNO60229 2985 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 FIGNL2A6NMB9 653 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 OR4C45A6NMZ5 311 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 IFITM5A6NNB3 132 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 WDR1O75083 606 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 CST2P09228 141 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 CD3GP09693 182 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 GABRA1P14867 456 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 KIR3DL2P43630 455 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 OR3A2P47893 321 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 CLDN12P56749 244 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 RTL6Q6ICC9 239 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SEM1Q6ZVN7 128 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SLC7A6Q92536 515 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 BEX2Q9BXY8 128 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SLITRK2Q9H156 845 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SLC5A6Q9Y289 635 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 RBMX2Q9Y388 322 aaKnown RBP11.58□□□□□ -0.56
VRK3-205ENST00000593919 EMC9Q9Y3B6 208 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 FAM215AQ9Y5M1 114 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 R4GMQ9 66 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 V9GY05 133 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 MBD3L4A6NDZ8 208 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 MBD3L3A6NE82 208 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 MBD3L5A6NJ08 208 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 TMEM212A6NML5 194 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 AIPO00170 330 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 UBL3O95164 117 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 ABOP16442 354 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 MAPK3P27361 379 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 DDOSTP39656 456 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 RAB25P57735 213 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 HIST1H3AP68431 136 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 ARF1P84077 181 aaKnown RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 DGCR2P98153 550 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 STK11Q15831 433 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 NRN1LQ496H8 165 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 HIST2H3PS2Q5TEC6 136 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 OR2A2Q6IF42 318 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 TFAP2EQ6VUC0 442 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 STAC2Q6ZMT1 411 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 HIST2H3AQ71DI3 136 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 CATSPERDQ86XM0 798 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 CMTM4Q8IZR5 234 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 CNEP1R1Q8N9A8 125 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 KDF1Q8NAX2 398 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 MBD3L2Q8NHZ7 208 aaPredicted RBP11.57□□□□□ -0.56
VRK3-205ENST00000593919 FAM57AQ8TBR7 257 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 ABCG5Q9H222 651 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 ASF1BQ9NVP2 202 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 SLC22A13Q9Y226 551 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 SHANK1Q9Y566 2161 aa11.57□□□□□ -0.56
VRK3-205ENST00000593919 TRBV5-5A0A0J9YX44 114 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 TMEM269A0A1B0GVZ9 245 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 PATE4P0C8F1 98 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 TRAPPC2P0DI81 140 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 TRAPPC2BP0DI82 140 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 HSD11B1P28845 292 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 KIR2DL2P43627 348 aaPredicted RBP11.56□□□□□ -0.56
VRK3-205ENST00000593919 CCR9P51686 369 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 PITPNAQ00169 270 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 FOXF2Q12947 444 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 SF3B4Q15427 424 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK3-205ENST00000593919 ZFP69Q49AA0 526 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 CCDC92Q53HC0 331 aaPredicted RBP11.56□□□□□ -0.56
VRK3-205ENST00000593919 MTFR2Q6P444 385 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 VWA1Q6PCB0 445 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 ZNF627Q7L945 461 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 SLC16A14Q7RTX9 510 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 SKA3Q8IX90 412 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 RPRMLQ8N4K4 120 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 OR51A4Q8NGJ6 313 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 CAPSLQ8WWF8 208 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 PPP1R14AQ96A00 147 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 ZNF486Q96H40 463 aaPredicted RBP11.56□□□□□ -0.56
VRK3-205ENST00000593919 LIN7BQ9HAP6 207 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 RANGRFQ9HD47 186 aaPredicted RBP11.56□□□□□ -0.56
VRK3-205ENST00000593919 G6PC2Q9NQR9 355 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 PLEK2Q9NYT0 353 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 N6AMT1Q9Y5N5 214 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 CACNG2Q9Y698 323 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 COL6A6A6NMZ7 2263 aa11.56□□□□□ -0.56
VRK3-205ENST00000593919 FARS2O95363 451 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms