RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 C3orf80F5H4A9 247 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 P2RY10O00398 339 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 FCN3O75636 299 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 TOX4O94842 621 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 RENP00797 406 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 H2AFXP16104 143 aaPredicted RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 ECH1Q13011 328 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 MALLQ13021 153 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 OR8G1Q15617 311 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 RFX4Q33E94 735 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 MRPL21Q7Z2W9 205 aaKnown RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 ZBTB46Q86UZ6 589 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 SPRYD4Q8WW59 207 aaPredicted RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 MAP6Q96JE9 813 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 ADAT1Q9BUB4 502 aaKnown RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 KRCC1Q9NPI7 259 aaPredicted RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 MRPL22Q9NWU5 206 aaKnown RBP13.55□□□□□ -0.24
LIG1-205ENST00000593425 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 RNF7Q9UBF6 113 aa13.55□□□□□ -0.24
LIG1-205ENST00000593425 OR6C68A6NDL8 312 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 CD300LBA8K4G0 201 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 M0R135 149 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 LGALS8O00214 317 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 ARPC3O15145 178 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 ADAM20O43506 726 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 PTBP3O95758 552 aaKnown RBP13.54□□□□□ -0.24
LIG1-205ENST00000593425 SLC6A6P31641 620 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 OR8B8Q15620 311 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 SNAI3Q3KNW1 292 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 SLC36A3Q495N2 470 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 OR2AE1Q8NHA4 323 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 ZNF799Q96GE5 643 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 FAM71F1Q96KD3 344 aaPredicted RBP13.54□□□□□ -0.24
LIG1-205ENST00000593425 WDFY2Q96P53 400 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 CCT8L2Q96SF2 557 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 SIRPDQ9H106 197 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 RASSF4Q9H2L5 321 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 ACOXLQ9NUZ1 547 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 ABCD2Q9UBJ2 740 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 POMT1Q9Y6A1 747 aa13.54□□□□□ -0.24
LIG1-205ENST00000593425 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 PSKH1P11801 424 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 RPS27P42677 84 aaKnown RBP13.53□□□□□ -0.24
LIG1-205ENST00000593425 NUDT2P50583 147 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 TPTEP56180 551 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 ZNF92Q03936 586 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 CD276Q5ZPR3 534 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 GLYATQ6IB77 296 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 HACD2Q6Y1H2 254 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 ZNF826PQ6ZT77 177 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 GATAD2BQ8WXI9 593 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 LHX4Q969G2 390 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 IFT27Q9BW83 186 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 MMP27Q9H306 513 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 EFCAB1Q9HAE3 211 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 DCAF13Q9NV06 445 aaKnown RBP13.53□□□□□ -0.24
LIG1-205ENST00000593425 KIF17Q9P2E2 1029 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 V9GYQ6 96 aa13.53□□□□□ -0.24
LIG1-205ENST00000593425 PRKDCP78527 4128 aaKnown RBP13.53□□□□□ -0.24
LIG1-205ENST00000593425 IGHV1-69DA0A0B4J2H0 117 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 OOEPA6NGQ2 149 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 IGHV1-69P01742 117 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 IGHV4-59P01825 116 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 GYPAP02724 150 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 LIPFP07098 398 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 KCNJ8Q15842 424 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 GLYATL3Q5SZD4 288 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 METTL11BQ5VVY1 283 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 ZNF620Q6ZNG0 422 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 GCSAMQ8N6F7 178 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 SSMEM1Q8WWF3 244 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 DYRK2Q92630 601 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 SLC22A4Q9H015 551 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 ARGLU1Q9NWB6 273 aaPredicted RBP13.52□□□□□ -0.25
LIG1-205ENST00000593425 C1orf123Q9NWV4 160 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 SAMD4AQ9UPU9 718 aaKnown RBP13.52□□□□□ -0.25
LIG1-205ENST00000593425 RNF114Q9Y508 228 aa13.52□□□□□ -0.25
LIG1-205ENST00000593425 TRAV38-1A0A0B4J264 116 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 GGT3PA6NGU5 568 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 M0QZ24 198 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 GPR137BO60478 399 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 GMDSO60547 372 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 GADD45GO95257 159 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 SEMG1P04279 462 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 NOS3P29474 1203 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 PYCR1P32322 319 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 PSME3P61289 254 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 ARF6P62330 175 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 SPIBQ01892 262 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 POU4F2Q12837 409 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 KRT72Q14CN4 511 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 SLC35F1Q5T1Q4 408 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
LIG1-205ENST00000593425 LYPD4Q6UWN0 246 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms