RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 Q5PR19 223 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 GLYATL3Q5SZD4 288 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 USP51Q70EK9 711 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 PRSS45Q7RTY3 260 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 OR2AE1Q8NHA4 323 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 OR10A2Q9H208 303 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 OPA3Q9H6K4 179 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 CYSLTR2Q9NS75 346 aa12.76□□□□□ -0.37
DDX39A-221ENST00000593026 MRM2Q9UI43 246 aaKnown RBP12.76□□□□□ -0.37
DDX39A-221ENST00000593026 EXOGQ9Y2C4 368 aaKnown RBP12.76□□□□□ -0.37
DDX39A-221ENST00000593026 TMEM269A0A1B0GVZ9 245 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 C17orf100A8MU93 164 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 J3QRE1 110 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF81P51508 661 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 PRSS12P56730 875 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF85Q03923 595 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF92Q03936 586 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 CDK5R2Q13319 367 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 TIGD6Q17RP2 521 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 GFOD2Q3B7J2 385 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 OR2T2Q6IF00 324 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 THAP5Q7Z6K1 395 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 OR5AS1Q8N127 324 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
DDX39A-221ENST00000593026 NEU4Q8WWR8 484 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-221ENST00000593026 GTF3AQ92664 365 aaKnown RBP12.75□□□□□ -0.37
DDX39A-221ENST00000593026 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 ACOD1A6NK06 481 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 IQCF6A8MYZ5 107 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 SSX4O60224 188 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 SULT1C4O75897 302 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
DDX39A-221ENST00000593026 MMP16P51512 607 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 TESK1Q15569 626 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF684Q5T5D7 378 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 PLEKHG7Q6ZR37 379 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 BHLHE23Q8NDY6 225 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 OR52I1Q8NGK6 324 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 FBLIM1Q8WUP2 373 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 SPSB4Q96A44 273 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
DDX39A-221ENST00000593026 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
DDX39A-221ENST00000593026 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 MSL2Q9HCI7 577 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
DDX39A-221ENST00000593026 FAM206AQ9NX38 181 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 GTF2A1LQ9UNN4 478 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 MYRFQ9Y2G1 1151 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 ARID1AO14497 2285 aa12.74□□□□□ -0.37
DDX39A-221ENST00000593026 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 LOC110117498-PIK3R3F6TDL0 507 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 SPRY3O43610 288 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 LY6HO94772 140 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 RPP14O95059 124 aaKnown RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 PNPP00491 289 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 IGHA1P01876 353 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 CFL1P23528 166 aaKnown RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ACTA2P62736 377 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ACTG2P63267 376 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 MFGE8Q08431 387 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 PCGF3Q3KNV8 242 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 KRTAP1-3Q8IUG1 177 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 SGK3Q96BR1 496 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 DIRC2Q96SL1 478 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 MYCBPQ99417 103 aaPredicted RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ANKRD60Q9BZ19 345 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 PBOV1Q9GZY1 135 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 MOB1AQ9H8S9 216 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 INPP5EQ9NRR6 644 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 NKIRAS2Q9NYR9 191 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF319Q9P2F9 582 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 NUFIP1Q9UHK0 495 aaKnown RBP12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ZNF391Q9UJN7 358 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 GNG8Q9UK08 70 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 ZDHHC8Q9ULC8 765 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 R4GMQ9 66 aa12.73□□□□□ -0.37
DDX39A-221ENST00000593026 PRRC2AP48634 2157 aaKnown RBP12.72□□□□□ -0.37
DDX39A-221ENST00000593026 CD300LBA8K4G0 201 aa12.72□□□□□ -0.37
DDX39A-221ENST00000593026 TPD52L2O43399 206 aaKnown RBP12.72□□□□□ -0.37
DDX39A-221ENST00000593026 SRSF10O75494 262 aaKnown RBP12.72□□□□□ -0.37
DDX39A-221ENST00000593026 IGHV1-46P01743 117 aa12.72□□□□□ -0.37
DDX39A-221ENST00000593026 MAGEB1P43366 347 aa12.72□□□□□ -0.37
DDX39A-221ENST00000593026 CCL8P80075 99 aa12.72□□□□□ -0.37
DDX39A-221ENST00000593026 GALEQ14376 348 aa12.72□□□□□ -0.37
DDX39A-221ENST00000593026 CLEC12BQ2HXU8 276 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms