RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MTORP42345 2549 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 P2RY10O00398 339 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MYL12BO14950 172 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 TBX1O43435 398 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 INMTO95050 263 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 TTRP02766 147 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 SOD3P08294 240 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 COX5BP10606 129 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 CD99P14209 185 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MYL12AP19105 171 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 PCMT1P22061 227 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 THBS4P35443 961 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 RIDAP52758 137 aaKnown RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF92Q03936 586 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 EMX1Q04741 257 aaPredicted RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 INSL4Q14641 139 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 NEDD8Q15843 81 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 Q5PR19 223 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM108Q6UXF1 575 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 FAM220AQ7Z4H9 259 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 CATSPERDQ86XM0 798 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 KRTAP1-3Q8IUG1 177 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 NANOGP1Q8N7R0 232 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF611Q8N823 705 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 SLC25A40Q8TBP6 338 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 TMEM171Q8WVE6 324 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 IPCEF1Q8WWN9 437 aaPredicted RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MYDGFQ969H8 173 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 FBXW5Q969U6 566 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 DCLRE1CQ96SD1 692 aaKnown RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MYCBPQ99417 103 aaPredicted RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MNTQ99583 582 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 KCNS3Q9BQ31 491 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 SYT3Q9BQG1 590 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 CDCA4Q9BXL8 241 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 MROQ9BYG7 248 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 PBOV1Q9GZY1 135 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 INPP5EQ9NRR6 644 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 CISD1Q9NZ45 108 aaKnown RBP8.28□□□□□ -1.08
DDX39A-220ENST00000593008 POU2F3Q9UKI9 436 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ATP23Q9Y6H3 246 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 R4GMQ9 66 aa8.28□□□□□ -1.08
DDX39A-220ENST00000593008 ACANP16112 2415 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 TMEM269A0A1B0GVZ9 245 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 TMEM129A0AVI4 362 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 IRGMA1A4Y4 181 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 A6NIN4 97 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 LOC110117498-PIK3R3F6TDL0 507 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PHYHO14832 338 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 CLPTM1O96005 669 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 CRYAAP02489 173 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 MT-ND5P03915 603 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 NR4A1P22736 598 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PTAFRP25105 342 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 CDKN1AP38936 164 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PTH2RP49190 550 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 TPTEP56180 551 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 WNT4P56705 351 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PPP1CBP62140 327 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ACTA2P62736 377 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 GRB2P62993 217 aaKnown RBP8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ACTG2P63267 376 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 MED22Q15528 200 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 DMRTC1Q5HYR2 192 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 BCL2L15Q5TBC7 163 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 KCTD18Q6PI47 426 aaPredicted RBP8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ARL9Q6T311 187 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 COLCA1Q6ZS62 124 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 KCTD8Q6ZWB6 473 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.27□□□□□ -1.09
DDX39A-220ENST00000593008 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 SYS1Q8N2H4 156 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR51A4Q8NGJ6 313 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR1J1Q8NGS3 322 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR2G2Q8NGZ5 317 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR52N1Q8NH53 320 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 SGK3Q96BR1 496 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ORAI1Q96D31 301 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OPALINQ96PE5 141 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PDCD1LG2Q9BQ51 273 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 C1QTNF5Q9BXJ0 243 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR2J1Q9GZK6 312 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ACOT13Q9NPJ3 140 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 FRRS1LQ9P0K9 344 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 ATPIF1Q9UII2 106 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 FBXO9Q9UK97 447 aaPredicted RBP8.27□□□□□ -1.09
DDX39A-220ENST00000593008 OR52A1Q9UKL2 312 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 BLOC1S6Q9UL45 172 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 CAB39Q9Y376 341 aaPredicted RBP8.27□□□□□ -1.09
DDX39A-220ENST00000593008 PCDHGB1Q9Y5G3 927 aa8.27□□□□□ -1.09
DDX39A-220ENST00000593008 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms