RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	TXNDC12	O95881	172 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	IGHV3-13	P01766	116 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	HIST1H1C	P16403	213 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	ZNF3	P17036	446 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	ZFP36	P26651	326 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	COMP	P49747	757 aa	Predicted RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	MMP15	P51511	669 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	SNRPG	P62308	76 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	EFNB1	P98172	346 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	PSG4	Q00888	419 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	CRMP1	Q14194	572 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	HFE	Q30201	348 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	MEST	Q5EB52	335 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	C10orf128	Q5T292	105 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	ARMC4	Q5T2S8	1044 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	GPR139	Q6DWJ6	353 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	LAIR2	Q6ISS4	152 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	JAZF1	Q86VZ6	243 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	SIGLECL1	Q8N7X8	197 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	CYB561A3	Q8NBI2	242 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	SLC37A3	Q8NCC5	494 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	OR1J2	Q8NGS2	313 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	TRUB1	Q8WWH5	349 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	OTULIN	Q96BN8	352 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	NMD3	Q96D46	503 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	MARS2	Q96GW9	593 aa	Known RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	POM121L2	Q96KW2	1035 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	WNT5B	Q9H1J7	359 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	C1orf198	Q9H425	327 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	FN3K	Q9H479	309 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	C7orf69	Q9H7B7	122 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	MMP26	Q9NRE1	261 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	DNAJC27	Q9NZQ0	273 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	GPR160	Q9UJ42	338 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	SOX21	Q9Y651	276 aa	Predicted RBP	11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	TRRAP	Q9Y4A5	3859 aa		11.19	□□□□□ -0.62
NPC1-212	ENST00000591107	IGHV3OR16-10	A0A075B7F0	116 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	NPIPB13	A6NJU9	1138 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	FAM183A	A6NL82	134 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	NPIPB4	C9JG80	1138 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	PRR23D1	E9PI22	279 aa	Predicted RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	FSHB	P01225	129 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	SCG5	P05408	212 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	LAP3	P28838	519 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	GCH1	P30793	250 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	DAP3	P51398	398 aa	Known RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	UBA52	P62987	128 aa	Known RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	MRPS34	P82930	218 aa	Known RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	TEK	Q02763	1124 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	SMN1	Q16637	294 aa	Known RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	C6orf141	Q5SZD1	244 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	ZNF774	Q6NX45	483 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	PLBD1	Q6P4A8	553 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	LEG1	Q6P5S2	330 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	CPO	Q8IVL8	374 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	BCL6B	Q8N143	479 aa	Predicted RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	KLF14	Q8TD94	323 aa	Predicted RBP	11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	ELMOD3	Q96FG2	381 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	TIMD4	Q96H15	378 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	SUCNR1	Q9BXA5	334 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	OR2H1	Q9GZK4	316 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	MED20	Q9H944	212 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	EMC7	Q9NPA0	242 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	CLN6	Q9NWW5	311 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	NKIRAS2	Q9NYR9	191 aa		11.18	□□□□□ -0.62
NPC1-212	ENST00000591107	SLC1A7	O00341	560 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	XKRY	O14609	159 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	FAM20B	O75063	409 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	ENTPD6	O75354	484 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	RPSA	P08865	295 aa	Known RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	PAICS	P22234	425 aa	Known RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	CDKN2A	P42771	156 aa	Known RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	GDI2	P50395	445 aa	Known RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	PPP1CB	P62140	327 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	SCGB2A2	Q13296	93 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	FAM205BP	Q63HN1	556 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	SLC25A47	Q6Q0C1	308 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	USP43	Q70EL4	1123 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	DEFB108B	Q8NET1	73 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	BBS1	Q8NFJ9	593 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	BPIFB6	Q8NFQ5	453 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	OR9Q1	Q8NGQ5	310 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	NANP	Q8TBE9	248 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	RAB1C	Q92928	201 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	C1orf147	Q96MC9	270 aa	Predicted RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107		Q96MT0	163 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	ZNF582	Q96NG8	517 aa	Predicted RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	NR1H4	Q96RI1	486 aa	Predicted RBP	11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	NMNAT3	Q96T66	252 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	HCAR1	Q9BXC0	346 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	SIAE	Q9HAT2	523 aa		11.17	□□□□□ -0.62
NPC1-212	ENST00000591107	PLSCR5	A0PG75	271 aa		11.16	□□□□□ -0.62
NPC1-212	ENST00000591107	OR6C68	A6NDL8	312 aa		11.16	□□□□□ -0.62
NPC1-212	ENST00000591107	DNAJC9-AS1	A6NH13	148 aa		11.16	□□□□□ -0.62
NPC1-212	ENST00000591107		A6NIZ1	184 aa		11.16	□□□□□ -0.62
NPC1-212	ENST00000591107	XPNPEP2	O43895	674 aa		11.16	□□□□□ -0.62
NPC1-212	ENST00000591107	REN	P00797	406 aa		11.16	□□□□□ -0.62

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