RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ZNF92Q03936 586 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 POU4F2Q12837 409 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 TMED1Q13445 227 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 RCN1Q15293 331 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 ZIK1Q3SY52 487 aaPredicted RBP10.11□□□□□ -0.79
LIG3-213ENST00000590630 SLC25A30Q5SVS4 291 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 Q6ZR03 302 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 USP51Q70EK9 711 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 OR5AS1Q8N127 324 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 BHLHE23Q8NDY6 225 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 OR2Z1Q8NG97 314 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 OR13G1Q8NGZ3 307 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 SPSB4Q96A44 273 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 MBOAT4Q96T53 435 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 SLC29A1Q99808 456 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
LIG3-213ENST00000590630 MROQ9BYG7 248 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 GSX1Q9H4S2 264 aaPredicted RBP10.11□□□□□ -0.79
LIG3-213ENST00000590630 ADGRL4Q9HBW9 690 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 ZNF275Q9NSD4 429 aaPredicted RBP10.11□□□□□ -0.79
LIG3-213ENST00000590630 KLHDC2Q9Y2U9 406 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 ABCA2Q9BZC7 2435 aa10.11□□□□□ -0.79
LIG3-213ENST00000590630 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 A0A1B0GWJ7 208 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 ANKRD65E5RJM6 399 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 PHYHO14832 338 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 CDC14BO60729 498 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 ZNF254O75437 659 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 LY6G6DO95868 133 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 TACSTD2P09758 323 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 ANPEPP15144 967 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 TNFRSF1AP19438 455 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 CFL1P23528 166 aaKnown RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 HCCSP53701 268 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 ZNF121P58317 390 aaPredicted RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 SNRPGP62308 76 aaKnown RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 TMEM249Q2WGJ8 235 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 HFEQ30201 348 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 GLYATL3Q5SZD4 288 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 LRRN1Q6UXK5 716 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 PRSS45Q7RTY3 260 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 KRT77Q7Z794 578 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 SLC35F2Q8IXU6 374 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 ZNF679Q8IYX0 411 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 OR2AE1Q8NHA4 323 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 SPRYD4Q8WW59 207 aaPredicted RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 YIPF5Q969M3 257 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 RDH12Q96NR8 316 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 SLC30A2Q9BRI3 323 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 SLC22A4Q9H015 551 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 OR10A2Q9H208 303 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 RGCCQ9H4X1 137 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 CLN6Q9NWW5 311 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 DNAJC27Q9NZQ0 273 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 IL19Q9UHD0 177 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.1□□□□□ -0.79
LIG3-213ENST00000590630 NOP16Q9Y3C1 178 aaKnown RBP10.1□□□□□ -0.79
LIG3-213ENST00000590630 LRP12Q9Y561 859 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 GMPPBQ9Y5P6 360 aa10.1□□□□□ -0.79
LIG3-213ENST00000590630 IGHV4-61A0A0C4DH41 118 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 SNTNA6NMZ2 147 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 CD300LBA8K4G0 201 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 CLDN25C9JDP6 229 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 TBX1O43435 398 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 MPZL2O60487 215 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 SBK2P0C263 348 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 ANOS1P23352 680 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 DCTDP32321 178 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 DDOSTP39656 456 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 GPR6P46095 362 aaPredicted RBP10.09□□□□□ -0.79
LIG3-213ENST00000590630 CHN2P52757 468 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 CXCR4P61073 352 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 KRTAP1-1Q07627 177 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 SLC3A1Q07837 685 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 TRIP10Q15642 601 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 TIGD6Q17RP2 521 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 MEDAGQ5VYS4 303 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 FAM57BQ71RH2 274 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 PACRGLQ8N7B6 248 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 OR51G2Q8NGK0 314 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 HPS1Q92902 700 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 OR8B4Q96RC9 309 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 SMPD3Q9NY59 655 aaPredicted RBP10.09□□□□□ -0.79
LIG3-213ENST00000590630 MRPL15Q9P015 296 aaKnown RBP10.09□□□□□ -0.79
LIG3-213ENST00000590630 ZNF391Q9UJN7 358 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 COPS3Q9UNS2 423 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 N6AMT1Q9Y5N5 214 aa10.09□□□□□ -0.79
LIG3-213ENST00000590630 FN1P02751 2386 aaKnown RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 LOC100130705A0A1B0GUX0 176 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 C5orf63A6NC05 138 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 GGT3PA6NGU5 568 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 ACOD1A6NK06 481 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 ZNF670-ZNF695F2Z2N8 137 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 SLC16A6O15403 523 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 MLNRO43193 412 aa10.08□□□□□ -0.8
LIG3-213ENST00000590630 PPIHO43447 177 aaKnown RBP10.08□□□□□ -0.8
LIG3-213ENST00000590630 CD5LO43866 347 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms