RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FAM213BQ8TBF2 198 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 MUCL1Q96DR8 90 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 ZBP1Q9H171 429 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 METTL9Q9H1A3 318 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 XRCC2O43543 280 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 TIMP2P16035 220 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 TMEM33P57088 247 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 ENPP2Q13822 863 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 LY6G5CQ5SRR4 150 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 SFXN5Q8TD22 340 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 STACQ99469 402 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 MENTQ9BUN1 341 aa13.59□□□□□ -0.23
CIRBP-228ENST00000590347 IGKV1-8A0A0C4DH67 115 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 CDRT15L2A8MXV6 281 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 C1QTNF3-AMACRE9PGA6 284 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 BCAT2O15382 392 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-228ENST00000590347 LDB3O75112 727 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 CSTBP04080 98 aaKnown RBP13.58□□□□□ -0.24
CIRBP-228ENST00000590347 THBS1P07996 1170 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 UBE2KP61086 200 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 CSNK1G2P78368 415 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 POMZP3Q6PJE2 187 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 CLEC18BQ6UXF7 455 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 ARL6IP6Q8N6S5 226 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 COX18Q8N8Q8 333 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 SUMF2Q8NBJ7 301 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 ZNF417Q8TAU3 575 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 SLC2A12Q8TD20 617 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 TMEM208Q9BTX3 173 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 NDUFB2O95178 105 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 ZNF205O95201 554 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 IL18BPO95998 194 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 OR4A8P0C604 315 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 HTR2CP28335 458 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 GPR1P46091 355 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 RPL29P47914 159 aaKnown RBP13.58□□□□□ -0.24
CIRBP-228ENST00000590347 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 ELOBQ15370 118 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-228ENST00000590347 MTSS1LQ765P7 747 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 PRR18Q8N4B5 295 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 OR2L2Q8NH16 312 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 NDUFAF3Q9BU61 184 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 KIF26BQ2KJY2 2108 aa13.58□□□□□ -0.24
CIRBP-228ENST00000590347 DUS4LO95620 317 aaKnown RBP13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PNPP00491 289 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 GZMBP10144 247 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 C5AR1P21730 350 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 CLDN6P56747 220 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 SRSF4Q08170 494 aaKnown RBP13.57□□□□□ -0.24
CIRBP-228ENST00000590347 RPUSD3Q6P087 351 aaKnown RBP13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PRSS54Q6PEW0 395 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 LILRB3O75022 631 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 RPL12P30050 165 aaKnown RBP13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PMELP40967 661 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 LINC01590Q5TEZ4 76 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 TANGO2Q6ICL3 276 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PRRT1Q99946 306 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 KCNK6Q9Y257 313 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 H3BQ15 152 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 SLC17A2O00624 439 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 HKR1P10072 659 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 GLRA1P23415 457 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 IGFALSP35858 605 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 FOXO1Q12778 655 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 FAM53BQ14153 422 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 ANKRD39Q53RE8 183 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 SLC48A1Q6P1K1 146 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 BTNL3Q6UXE8 466 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 TMEM182Q6ZP80 229 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-228ENST00000590347 RNF144BQ7Z419 303 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 ZNF101Q8IZC7 436 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 OR4N2Q8NGD1 307 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 ASB13Q8WXK3 278 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 MALSU1Q96EH3 234 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 LPAR4Q99677 370 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 LMAN1LQ9HAT1 526 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PARP11Q9NR21 331 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 PADI1Q9ULC6 663 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 B9D1Q9UPM9 204 aa13.57□□□□□ -0.24
CIRBP-228ENST00000590347 FAM221BA6H8Z2 402 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 EIF1AYO14602 144 aaKnown RBP13.56□□□□□ -0.24
CIRBP-228ENST00000590347 LDLRAD4O15165 306 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 CA11O75493 328 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 MMP9P14780 707 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 S100A7P31151 101 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 HOXA6P31267 233 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 GABRA3P34903 492 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 EIF1AXP47813 144 aaKnown RBP13.56□□□□□ -0.24
CIRBP-228ENST00000590347 OR4D6Q8NGJ1 314 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 OR5B2Q96R09 309 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 SLC35B3Q9H1N7 401 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 DUSP22Q9NRW4 184 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 SLC25A13Q9UJS0 675 aa13.56□□□□□ -0.24
CIRBP-228ENST00000590347 TRBV5-5A0A0J9YX44 114 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms