RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 C5orf49A4QMS7 147 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 PSMB1P20618 241 aaKnown RBP15.15■□□□□ 0.02
CXXC1-212ENST00000589940 IL32P24001 234 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 HNRNPA0Q13151 305 aaKnown RBP15.15■□□□□ 0.02
CXXC1-212ENST00000589940 LSAMPQ13449 338 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 GFOD2Q3B7J2 385 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 ZNF404Q494X3 552 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 C1QTNF5Q9BXJ0 243 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 CACNA1BQ00975 2339 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 SMIM30A4D0T7 59 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 OR5H1A6NKK0 313 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 APLNRP35414 380 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 DOK3Q7L591 496 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 LIX1LQ8IVB5 337 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 MCFD2Q8NI22 146 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 MS4A3Q96HJ5 214 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 NXF2Q9GZY0 626 aaKnown RBP15.15■□□□□ 0.02
CXXC1-212ENST00000589940 TCF7L1Q9HCS4 588 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 ZNF275Q9NSD4 429 aaPredicted RBP15.15■□□□□ 0.02
CXXC1-212ENST00000589940 JKAMPQ9P055 326 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 A3GALT2U3KPV4 340 aa15.15■□□□□ 0.02
CXXC1-212ENST00000589940 NBASA2RRP1 2371 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 COL6A6A6NMZ7 2263 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 CCL2P13500 99 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 ZNF14P17017 642 aaPredicted RBP15.14■□□□□ 0.01
CXXC1-212ENST00000589940 CCNOP22674 350 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 CAV3P56539 151 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 COLCA1Q6ZS62 124 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 NR2C2APQ86WQ0 139 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 RELL2Q8NC24 303 aaPredicted RBP15.14■□□□□ 0.01
CXXC1-212ENST00000589940 SLC30A7Q8NEW0 376 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 SLITRK2Q9H156 845 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 EPG5Q9HCE0 2579 aa15.14■□□□□ 0.01
CXXC1-212ENST00000589940 NCR1O76036 304 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 CBR1P16152 277 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 RAB3BP20337 219 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 MRPL49Q13405 166 aaKnown RBP15.13■□□□□ 0.01
CXXC1-212ENST00000589940 PLPP7Q8NBV4 271 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 FAM71F1Q96KD3 344 aaPredicted RBP15.13■□□□□ 0.01
CXXC1-212ENST00000589940 LYZL4Q96KX0 146 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 SOX7Q9BT81 388 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 MMP27Q9H306 513 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 AMDHD2Q9Y303 409 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 ANKRD61A6NGH8 418 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 CCL21O00585 134 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 ATXN7O15265 892 aaPredicted RBP15.13■□□□□ 0.01
CXXC1-212ENST00000589940 IGKV3-15P01624 115 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 ZNF12P17014 697 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 SGK3Q96BR1 496 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 ELOVL5Q9NYP7 299 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 CKLFQ9UBR5 152 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 PLEKHB1Q9UF11 243 aaPredicted RBP15.13■□□□□ 0.01
CXXC1-212ENST00000589940 ZNF391Q9UJN7 358 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 CFAP46Q8IYW2 2715 aa15.13■□□□□ 0.01
CXXC1-212ENST00000589940 TRAV8-7A0A075B6U6 113 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 LMX1BO60663 402 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 FSTP19883 344 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 IDH3GP51553 393 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-212ENST00000589940 OR10A3P58181 314 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 CEP78Q5JTW2 689 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 TIMM23BQ5SRD1 257 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 ASPHD2Q6ICH7 369 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 PARP16Q8N5Y8 322 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 CCDC54Q8NEL0 328 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 OR1J2Q8NGS2 313 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 TBC1D15Q8TC07 691 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 S100PBPQ96BU1 408 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 RGCCQ9H4X1 137 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 A0A0G2JK05 382 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 PDCD5O14737 125 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 DHRS3O75911 302 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 CELA3BP08861 270 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 TBC1D28Q2M2D7 210 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 Q6ZSR3 168 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 CROCCP3Q8IVE0 287 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 STEAP2Q8NFT2 490 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 OR2AE1Q8NHA4 323 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 AP3S1Q92572 193 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 APOBEC3DQ96AK3 386 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-212ENST00000589940 FGGYQ96C11 551 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 REEP6Q96HR9 211 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 C6orf62Q9GZU0 229 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-212ENST00000589940 FOXJ3Q9UPW0 622 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 SLC25A15Q9Y619 301 aa15.12■□□□□ 0.01
CXXC1-212ENST00000589940 A0A075B6Q4 140 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 XRCC2O43543 280 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 MTRF1O75570 445 aaKnown RBP15.11■□□□□ 0.01
CXXC1-212ENST00000589940 AGFG2O95081 481 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 FAM27E3Q08E93 113 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 GLYATL3Q5SZD4 288 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 LRRTM1Q86UE6 522 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 MYPOPQ86VE0 399 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-212ENST00000589940 OR14K1Q8NGZ2 314 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 ADAT3Q96EY9 351 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-212ENST00000589940 MOV10Q9HCE1 1003 aaKnown RBP15.11■□□□□ 0.01
CXXC1-212ENST00000589940 TAS2R4Q9NYW5 299 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 AK6Q9Y3D8 172 aaKnown RBP15.11■□□□□ 0.01
CXXC1-212ENST00000589940 PCNX1Q96RV3 2341 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 LOC390937A0A1W2PQ73 354 aa15.11■□□□□ 0.01
CXXC1-212ENST00000589940 ZNF20P17024 532 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms