RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CATSPERDQ86XM0 798 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 MUC15Q8N387 334 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 OR8B12Q8NGG6 310 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 KLF14Q8TD94 323 aaPredicted RBP11.71□□□□□ -0.53
VMP1-210ENST00000589823 GATAD2BQ8WXI9 593 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.53
VMP1-210ENST00000589823 POFUT1Q9H488 388 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 BABAM2Q9NXR7 383 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 ZNF391Q9UJN7 358 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 FZR1Q9UM11 496 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 PTPN13Q12923 2485 aa11.71□□□□□ -0.53
VMP1-210ENST00000589823 CADP27708 2225 aa11.71□□□□□ -0.54
VMP1-210ENST00000589823 RAC2P15153 192 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 ZNF250P15622 560 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 SELEP16581 610 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 TTKP33981 857 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 SERPINF1P36955 418 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 MPV17P39210 176 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 KLF3P57682 345 aaPredicted RBP11.7□□□□□ -0.54
VMP1-210ENST00000589823 TAS2R43P59537 309 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 ZNF92Q03936 586 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 IRF3Q14653 427 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 MOGQ16653 247 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
VMP1-210ENST00000589823 FDX2Q6P4F2 183 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 FBXW12Q6X9E4 464 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 PGAP1Q75T13 922 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 KLBQ86Z14 1044 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 ELMOD2Q8IZ81 293 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 SVOPQ8N4V2 548 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 OR2G2Q8NGZ5 317 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 OR2AE1Q8NHA4 323 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 CMBLQ96DG6 245 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 REEP6Q96HR9 211 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 SYT3Q9BQG1 590 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 MRPL37Q9BZE1 423 aaKnown RBP11.7□□□□□ -0.54
VMP1-210ENST00000589823 RGCCQ9H4X1 137 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 PLEKHF2Q9H8W4 249 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 TRIM36Q9NQ86 728 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 G6PC2Q9NQR9 355 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 GPR160Q9UJ42 338 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 SLC22A13Q9Y226 551 aa11.7□□□□□ -0.54
VMP1-210ENST00000589823 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 A0A1W2PPW3 197 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 B9A039 149 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 TIMM8AO60220 97 aaPredicted RBP11.69□□□□□ -0.54
VMP1-210ENST00000589823 TGM4P49221 684 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 EVX1P49640 407 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 CCR9P51686 369 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 CDH15P55291 814 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 ALKBH1Q13686 389 aaKnown RBP11.69□□□□□ -0.54
VMP1-210ENST00000589823 GK2Q14410 553 aaPredicted RBP11.69□□□□□ -0.54
VMP1-210ENST00000589823 HLXQ14774 488 aaPredicted RBP11.69□□□□□ -0.54
VMP1-210ENST00000589823 MED22Q15528 200 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 MSMPQ1L6U9 139 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 CCDC58Q4VC31 144 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 ZNF773Q6PK81 442 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 OR51E1Q8TCB6 317 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 SPSB4Q96A44 273 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 HAVCR1Q96D42 359 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 NR1H4Q96RI1 486 aaPredicted RBP11.69□□□□□ -0.54
VMP1-210ENST00000589823 ZNF319Q9P2F9 582 aa11.69□□□□□ -0.54
VMP1-210ENST00000589823 RTTNQ86VV8 2226 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 TRBV2A0A0J9YWF9 115 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 GGT3PA6NGU5 568 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 E9PI62 339 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 CLPTM1O96005 669 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 TTRP02766 147 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 UBCP0CG48 685 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 BMP4P12644 408 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 PRF1P14222 555 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 ANOS1P23352 680 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 KIR3DL2P43630 455 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 NANOS3P60323 173 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 PSG7Q13046 419 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 SPHARQ15513 63 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 EFNB3Q15768 340 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 TBCEQ15813 527 aaPredicted RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 NKPD1Q17RQ9 610 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 ODF4Q2M2E3 257 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 TMEM244Q5VVB8 128 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 RPL22L1Q6P5R6 122 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 LRP11Q86VZ4 500 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 ZNF676Q8N7Q3 588 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 COMMD4Q9H0A8 199 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms