RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	TPD52L2	O43399	206 aa	Known RBP	10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	MPZL2	O60487	215 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	WBP4	O75554	376 aa	Known RBP	10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	ATP6V1G2	O95670	118 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	APOC1	P02654	83 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	OR2T7	P0C7T2	308 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	DAO	P14920	347 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	CAPG	P40121	348 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	PDLIM4	P50479	330 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	RIDA	P52758	137 aa	Known RBP	10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	ZNF85	Q03923	595 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	ZNF91	Q05481	1191 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	POU4F2	Q12837	409 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	GFOD2	Q3B7J2	385 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	CLEC2A	Q6UVW9	174 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	DNM1P46	Q6ZS02	220 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	PGAP1	Q75T13	922 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	ZNF679	Q8IYX0	411 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	OR2T27	Q8NH04	317 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	UBASH3B	Q8TF42	649 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	LGALS12	Q96DT0	336 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742		Q96MT0	163 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	SOX7	Q9BT81	388 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	MRO	Q9BYG7	248 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	VCX	Q9H320	206 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	MRM2	Q9UI43	246 aa	Known RBP	10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	ITPR3	Q14573	2671 aa		10.15	□□□□□ -0.78
RFX2-215	ENST00000589742	TMEM269	A0A1B0GVZ9	245 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	GGT3P	A6NGU5	568 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	SNTN	A6NMZ2	147 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	IQCF6	A8MYZ5	107 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	RNF223	E7ERA6	249 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742		H0YL77	283 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	PHYH	O14832	338 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	SMAD7	O15105	426 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	XRCC2	O43543	280 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	CDC14B	O60729	498 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	ZNF254	O75437	659 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	RPP14	O95059	124 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	PNP	P00491	289 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	MT-ND5	P03915	603 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	GNAO1	P09471	354 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	DBT	P11182	482 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	RBMX	P38159	391 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	LIPA	P38571	399 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	AQP4	P55087	323 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	PSMA6	P60900	246 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	ISL1	P61371	349 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	ROM1	Q03395	351 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	HNRNPA0	Q13151	305 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	TIGD6	Q17RP2	521 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	C6orf52	Q5T4I8	152 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	DEGS2	Q6QHC5	323 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	YIPF7	Q8N8F6	280 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	MAPK1IP1L	Q8NDC0	245 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	OR8G5	Q8NG78	346 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	OR2Z1	Q8NG97	314 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	OR8B12	Q8NGG6	310 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	FAM168A	Q92567	244 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	YIPF5	Q969M3	257 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	REEP6	Q96HR9	211 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	RHNO1	Q9BSD3	238 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	REPIN1	Q9BWE0	567 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	OR10A2	Q9H208	303 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	NIPAL2	Q9H841	368 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	SP140L	Q9H930	580 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	CYSLTR2	Q9NS75	346 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	DECR2	Q9NUI1	292 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	TREM2	Q9NZC2	230 aa		10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	EXOG	Q9Y2C4	368 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	RRP15	Q9Y3B9	282 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-215	ENST00000589742	OTOG	Q6ZRI0	2925 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	CD300LB	A8K4G0	201 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742		H0YAE9	185 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742		J3QRE1	110 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	HLA-DPB1	P04440	258 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	CD99	P14209	185 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	SELE	P16581	610 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	TNFAIP6	P98066	277 aa	Predicted RBP	10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	FAM3A	P98173	230 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	EGR3	Q06889	387 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	MFGE8	Q08431	387 aa	Predicted RBP	10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	CDK5R2	Q13319	367 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	RIPK1	Q13546	671 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	TP53I3	Q53FA7	332 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	ZNF786	Q8N393	782 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	SETD9	Q8NE22	299 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	OR10AD1	Q8NGE0	317 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	OR56B2P	Q8NGI1	322 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	OR52H1	Q8NGJ2	320 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	C10orf105	Q8TEF2	133 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	TFAP2C	Q92754	450 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	SPSB4	Q96A44	273 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	ELMOD3	Q96FG2	381 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	LYZL4	Q96KX0	146 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	SIGLEC11	Q96RL6	698 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	SLC30A2	Q9BRI3	323 aa		10.13	□□□□□ -0.79
RFX2-215	ENST00000589742	TMUB1	Q9BVT8	246 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms