RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TXNIPQ9H3M7 391 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 SMURF2Q9HAU4 748 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 GPR35Q9HC97 309 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 IL20Q9NYY1 176 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 OR5V1Q9UGF6 321 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 FOXJ3Q9UPW0 622 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 RCE1Q9Y256 329 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 SIGLEC9Q9Y336 463 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 NPTNQ9Y639 398 aa5.06□□□□□ -1.6
VPS25-204ENST00000589577 LOC102725191A0A1B0GVB3 256 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CENPBD1B2RD01 187 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 LRRN3E7EW58 273 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 PRR23D1E9PI22 279 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 H0YAE9 185 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CDC42EP2O14613 210 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ARPC3O15145 178 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TPD52L2O43399 206 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 AHCYL1O43865 530 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 SFTPBP07988 381 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 SBK2P0C263 348 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 PRR23D2P0DMB1 279 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 OR8G3PP0DMU2 310 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CRABP1P29762 137 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 GRK5P34947 590 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ATP6V1E1P36543 226 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CAPGP40121 348 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CAPZA2P47755 286 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CSNK1A1P48729 337 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CENPAP49450 140 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 MMP15P51511 669 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ZNF84P51523 738 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 EFNB2P52799 333 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 BLVRAP53004 296 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 BIDP55957 195 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CLDN17P56750 224 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 KLF3P57682 345 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 RPL27P61353 136 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 RPS7P62081 194 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 ERVK-25P63136 954 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 IL5RAQ01344 420 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 GLO1Q04760 184 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 PIGFQ07326 219 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 IL18R1Q13478 541 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 MED21Q13503 144 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 KRR1Q13601 381 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 GINS1Q14691 196 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ZMYND11Q15326 602 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ZIK1Q3SY52 487 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 NRN1LQ496H8 165 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TMEM155Q4W5P6 130 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 DMRTC1Q5HYR2 192 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 PHYHD1Q5SRE7 291 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ZNF770Q6IQ21 691 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 RGS7BPQ6MZT1 257 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 LRRN1Q6UXK5 716 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TMEM179BQ7Z7N9 219 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 LDLRAD3Q86YD5 345 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 GID4Q8IVV7 300 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 C8orf59Q8N0T1 100 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 MUC20Q8N307 709 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 OR2T4Q8NH00 348 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 FAM81AQ8TBF8 368 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TRUB1Q8WWH5 349 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 RFKQ969G6 155 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 SAMD8Q96LT4 415 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 Q96MT0 163 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 GPX7Q96SL4 187 aaPredicted RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 ALG12Q9BV10 488 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ADI1Q9BV57 179 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 GABARAPL3Q9BY60 117 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ULBP2Q9BZM5 246 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 KCNN2Q9H2S1 579 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 EGLN3Q9H6Z9 239 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 SLC25A19Q9HC21 320 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 DECR2Q9NUI1 292 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 CLN6Q9NWW5 311 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TVP23BQ9NYZ1 205 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 IL20RAQ9UHF4 553 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 RPUSD1Q9UJJ7 312 aaKnown RBP5.05□□□□□ -1.6
VPS25-204ENST00000589577 BLOC1S6Q9UL45 172 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 POLR1DQ9Y2S0 133 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 IER3IP1Q9Y5U9 82 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 ABCA13Q86UQ4 5058 aa5.05□□□□□ -1.6
VPS25-204ENST00000589577 TEX13CA0A0J9YWL9 993 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 LOC100130705A0A1B0GUX0 176 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 IRGMA1A4Y4 181 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 ZSCAN5BA6NJL1 495 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 ZNF99A8MXY4 864 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 MITFO75030 526 aaPredicted RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 FZD7O75084 574 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 PTP4A3O75365 173 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 FARS2O95363 451 aaKnown RBP5.04□□□□□ -1.6
VPS25-204ENST00000589577 SNAP29O95721 258 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 HLA-DQA2P01906 255 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 WNT2P09544 360 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 CD79AP11912 226 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 ACADSP16219 412 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 GGT2P36268 569 aa5.04□□□□□ -1.6
VPS25-204ENST00000589577 GIPRP48546 466 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms