RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PAHP00439 452 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 ACSM4P0C7M7 580 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 ZNF26P17031 533 aaPredicted RBP12.56□□□□□ -0.4
ACTN4-211ENST00000589528 EEF1B2P24534 225 aaKnown RBP12.56□□□□□ -0.4
ACTN4-211ENST00000589528 GABRA5P31644 462 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 GGT2P36268 569 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 COX10Q12887 443 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 ECH1Q13011 328 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 CDONQ4KMG0 1287 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 AGBL2Q5U5Z8 902 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 COLCA1Q6ZS62 124 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 FKBP9P1Q75LS8 142 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 CYP4Z1Q86W10 505 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 LINC00346Q8IVM7 164 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 CMTM4Q8IZR5 234 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 PIP4P2Q8N4L2 257 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 PLPP7Q8NBV4 271 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
ACTN4-211ENST00000589528 TMEM120AQ9BXJ8 343 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 SEMA6AQ9H2E6 1030 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 ZNRD1Q9P1U0 126 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
ACTN4-211ENST00000589528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.55□□□□□ -0.4
ACTN4-211ENST00000589528 GGT3PA6NGU5 568 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 FXYD1O00168 92 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 FFAR1O14842 300 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 NPPAP01160 153 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 OPN1MWP04001 364 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 GRPP07492 148 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
ACTN4-211ENST00000589528 TPTEP56180 551 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 MZT1Q08AG7 82 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 TRAP1Q12931 704 aaKnown RBP12.55□□□□□ -0.4
ACTN4-211ENST00000589528 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 SLC36A3Q495N2 470 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 Q6ZPA2 131 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 PTCHD4Q6ZW05 846 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 HIST2H3AQ71DI3 136 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 MRAPQ8TCY5 172 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 TSSK2Q96PF2 358 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 GID8Q9NWU2 228 aa12.55□□□□□ -0.4
ACTN4-211ENST00000589528 RPUSD1Q9UJJ7 312 aaKnown RBP12.55□□□□□ -0.4
ACTN4-211ENST00000589528 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 BBIP1A8MTZ0 92 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 HLA-DQA2P01906 255 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 POU4F2Q12837 409 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 IFI44LQ53G44 452 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 METTL21CQ5VZV1 264 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 DPY19L2P2Q6ZN68 376 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 CFAP77Q6ZQR2 320 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 SRA1Q9HD15 236 aaKnown RBP12.54□□□□□ -0.4
ACTN4-211ENST00000589528 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-211ENST00000589528 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
ACTN4-211ENST00000589528 C14orf119Q9NWQ9 140 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 DNAJB11Q9UBS4 358 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 SIGLEC7Q9Y286 467 aa12.54□□□□□ -0.4
ACTN4-211ENST00000589528 IGHV3OR15-7A0A075B7D8 119 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 CD300LBA8K4G0 201 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 GSTA4O15217 222 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 RENP00797 406 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■□□□ 12.5
ACTN4-211ENST00000589528 CDKN2AP42771 156 aaKnown RBP12.53□□□□□ -0.4
ACTN4-211ENST00000589528 MAPRE2Q15555 327 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 MICBQ29980 383 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-211ENST00000589528 COQ5Q5HYK3 327 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 SLC35E4Q6ICL7 350 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 SLC18B1Q6NT16 456 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 ZNF826PQ6ZT77 177 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 NAA40Q86UY6 237 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 LNX2Q8N448 690 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 SPTSSAQ969W0 71 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 PPP1R14AQ96A00 147 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
ACTN4-211ENST00000589528 GPX7Q96SL4 187 aaPredicted RBP12.53□□□□□ -0.4
ACTN4-211ENST00000589528 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 NSRP1Q9H0G5 558 aaKnown RBP12.53□□□□□ -0.4
ACTN4-211ENST00000589528 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 MRGBPQ9NV56 204 aa12.53□□□□□ -0.4
ACTN4-211ENST00000589528 M0R135 149 aa12.52□□□□□ -0.41
ACTN4-211ENST00000589528 DCTN6O00399 190 aa12.52□□□□□ -0.41
ACTN4-211ENST00000589528 NPFFO15130 113 aa12.52□□□□□ -0.41
ACTN4-211ENST00000589528 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms