RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FCER2	P06734	321 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CELA3A	P09093	270 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SMIM6	P0DI80	62 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CD8B	P10966	210 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF43	P17038	809 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	STAR	P49675	285 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	MECP2	P51608	486 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SUCLG1	P53597	346 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	RAC3	P60763	192 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GLO1	Q04760	184 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC3A1	Q07837	685 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC25A25	Q6KCM7	469 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GALNTL5	Q7Z4T8	443 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	TEX19	Q8NA77	164 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	NOXO1	Q8NFA2	376 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	PXT1	Q8NFP0	134 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	HAS2	Q92819	552 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SMIM19	Q96E16	107 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	MRPL48	Q96GC5	212 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC25A44	Q96H78	314 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	ADAD1	Q96M93	576 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	MBD2	Q9UBB5	411 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	LAMP5	Q9UJQ1	280 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CDV3	Q9UKY7	258 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SMAD9	O15198	467 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	DNPH1	O43598	174 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CREBL2	O60519	120 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	UPK3A	O75631	287 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GLS	O94925	669 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	HPX	P02790	462 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	S100A8	P05109	93 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR8G3P	P0DMU2	310 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	PSMB10	P40306	273 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CCR6	P51684	374 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	CCR9	P51686	369 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SLC17A1	Q14916	467 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	HIST3H3	Q16695	136 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	HFE	Q30201	348 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	DNM1P34	Q6PK57	102 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	ESPNL	Q6ZVH7	1005 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	MEIOB	Q8N635	442 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR6K3	Q8NGY3	331 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	SMIM4	Q8WVI0	70 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GHSR	Q92847	366 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	INTS12	Q96CB8	462 aa	Known RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	MS4A3	Q96HJ5	214 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	GPR160	Q9UJ42	338 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	TMEM14A	Q9Y6G1	99 aa		13.64	□□□□□ -0.23
DDX39A-209	ENST00000589318	EIF1AY	O14602	144 aa	Known RBP	13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	IGHG1	P01857	330 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	MAGEA5	P43359	124 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	NANOS3	P60323	173 aa	Known RBP	13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	PSMA6	P60900	246 aa	Known RBP	13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	PCK2	Q16822	640 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	HYAL4	Q2M3T9	481 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	FAM209B	Q5JX69	171 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	RPL22L1	Q6P5R6	122 aa	Known RBP	13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	ATRAID	Q6UW56	229 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	LRRC69	Q6ZNQ3	347 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	TMEM251	Q8N6I4	163 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	BEST4	Q8NFU0	473 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	SEC22C	Q9BRL7	303 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZCCHC4	Q9H5U6	513 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	B4GALT7	Q9UBV7	327 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF407	Q9C0G0	2248 aa		13.63	□□□□□ -0.23
DDX39A-209	ENST00000589318	FAM166B	A8MTA8	275 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	KHDRBS3	O75525	346 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	VAMP5	O95183	116 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	WNT11	O96014	354 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CD1A	P06126	327 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	UBB	P0CG47	229 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	UBC	P0CG48	685 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	MEOX1	P50221	254 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	GDI2	P50395	445 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	RPS11	P62280	158 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	RPS27A	P62979	156 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	UBA52	P62987	128 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ADAM8	P78325	824 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	DEFA5	Q01523	94 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	EGR3	Q06889	387 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	THEM4	Q5T1C6	240 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	LIPN	Q5VXI9	398 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ALKAL2	Q6UX46	152 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZIC4	Q8N9L1	334 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	FDCSP	Q8NFU4	85 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	OR13C5	Q8NGS8	318 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ABHD4	Q8TB40	342 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	THEM6	Q8WUY1	208 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	PNPLA2	Q96AD5	504 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	ZNF385A	Q96PM9	386 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	NAA11	Q9BSU3	229 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	KLHL9	Q9P2J3	617 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	CSAG2	Q9Y5P2	127 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	PHF3	Q92576	2039 aa	Known RBP	13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	DNAJC13	O75165	2243 aa		13.62	□□□□□ -0.23
DDX39A-209	ENST00000589318	TMEM82	A0PJX8	343 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms