RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 IL17BQ9UHF5 180 aa8.8□□□□□ -1
VPS25-202ENST00000589219 TUBD1Q9UJT1 453 aa8.8□□□□□ -1
VPS25-202ENST00000589219 FARSAQ9Y285 508 aaKnown RBP8.8□□□□□ -1
VPS25-202ENST00000589219 SEC16AO15027 2179 aa8.8□□□□□ -1
VPS25-202ENST00000589219 MYO18BQ8IUG5 2567 aa8.79□□□□□ -1
VPS25-202ENST00000589219 TRAV18A0A075B6X5 111 aa8.79□□□□□ -1
VPS25-202ENST00000589219 MEIKINA0A087WXM9 373 aa8.79□□□□□ -1
VPS25-202ENST00000589219 LINC01387J3KSC0 135 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ZIC3O60481 467 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GMDSO60547 372 aa8.79□□□□□ -1
VPS25-202ENST00000589219 RAMP1O60894 148 aa8.79□□□□□ -1
VPS25-202ENST00000589219 NDUFB6O95139 128 aa8.79□□□□□ -1
VPS25-202ENST00000589219 APOC1P02654 83 aa8.79□□□□□ -1
VPS25-202ENST00000589219 OPN1LWP04000 364 aa8.79□□□□□ -1
VPS25-202ENST00000589219 IL5P05113 134 aa8.79□□□□□ -1
VPS25-202ENST00000589219 LPLP06858 475 aa8.79□□□□□ -1
VPS25-202ENST00000589219 AKAIN1P0CW23 69 aa8.79□□□□□ -1
VPS25-202ENST00000589219 SULT1A3P0DMM9 295 aa8.79□□□□□ -1
VPS25-202ENST00000589219 SULT1A4P0DMN0 295 aa8.79□□□□□ -1
VPS25-202ENST00000589219 RAB3AP20336 220 aa8.79□□□□□ -1
VPS25-202ENST00000589219 CTSSP25774 331 aa8.79□□□□□ -1
VPS25-202ENST00000589219 CX3CR1P49238 355 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ZNF84P51523 738 aa8.79□□□□□ -1
VPS25-202ENST00000589219 EFNB2P52799 333 aa8.79□□□□□ -1
VPS25-202ENST00000589219 SPOCK1Q08629 439 aa8.79□□□□□ -1
VPS25-202ENST00000589219 RBMS2Q15434 407 aaKnown RBP8.79□□□□□ -1
VPS25-202ENST00000589219 PCGF3Q3KNV8 242 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GLYATL3Q5SZD4 288 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ZNF529Q6P280 563 aa8.79□□□□□ -1
VPS25-202ENST00000589219 MTFR2Q6P444 385 aa8.79□□□□□ -1
VPS25-202ENST00000589219 PGAP1Q75T13 922 aa8.79□□□□□ -1
VPS25-202ENST00000589219 DOK3Q7L591 496 aa8.79□□□□□ -1
VPS25-202ENST00000589219 LYPD6Q86Y78 171 aa8.79□□□□□ -1
VPS25-202ENST00000589219 TMEM123Q8N131 208 aa8.79□□□□□ -1
VPS25-202ENST00000589219 JAGN1Q8N5M9 183 aa8.79□□□□□ -1
VPS25-202ENST00000589219 OR5D14Q8NGL3 314 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GRPEL2Q8TAA5 225 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GPX8Q8TED1 209 aa8.79□□□□□ -1
VPS25-202ENST00000589219 PPP1R14AQ96A00 147 aa8.79□□□□□ -1
VPS25-202ENST00000589219 DACT3Q96B18 629 aaPredicted RBP8.79□□□□□ -1
VPS25-202ENST00000589219 MED30Q96HR3 178 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GNRHR2Q96P88 292 aa8.79□□□□□ -1
VPS25-202ENST00000589219 GPR87Q9BY21 358 aa8.79□□□□□ -1
VPS25-202ENST00000589219 SPRY4Q9C004 299 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ATG5Q9H1Y0 275 aa8.79□□□□□ -1
VPS25-202ENST00000589219 RANBP3Q9H6Z4 567 aaPredicted RBP8.79□□□□□ -1
VPS25-202ENST00000589219 TMEM138Q9NPI0 162 aa8.79□□□□□ -1
VPS25-202ENST00000589219 PNRC2Q9NPJ4 139 aaKnown RBP8.79□□□□□ -1
VPS25-202ENST00000589219 P4HTMQ9NXG6 502 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ABI3Q9P2A4 366 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ASH2LQ9UBL3 628 aa8.79□□□□□ -1
VPS25-202ENST00000589219 FBLN5Q9UBX5 448 aa8.79□□□□□ -1
VPS25-202ENST00000589219 KLK11Q9UBX7 282 aa8.79□□□□□ -1
VPS25-202ENST00000589219 CGGBP1Q9UFW8 167 aaPredicted RBP8.79□□□□□ -1
VPS25-202ENST00000589219 RAB22AQ9UL26 194 aa8.79□□□□□ -1
VPS25-202ENST00000589219 ING4Q9UNL4 249 aa8.79□□□□□ -1
VPS25-202ENST00000589219 RHBDD3Q9Y3P4 386 aa8.79□□□□□ -1
VPS25-202ENST00000589219 FLVCR1Q9Y5Y0 555 aa8.79□□□□□ -1
VPS25-202ENST00000589219 SPTA1P02549 2419 aa8.79□□□□□ -1
VPS25-202ENST00000589219 TLN1Q9Y490 2541 aaKnown RBP8.78□□□□□ -1
VPS25-202ENST00000589219 A0A0J9YW62 118 aa8.78□□□□□ -1
VPS25-202ENST00000589219 LOC101059948A0A1B0GTJ6 334 aa8.78□□□□□ -1
VPS25-202ENST00000589219 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
VPS25-202ENST00000589219 LRRC3CA6NJW4 275 aa8.78□□□□□ -1
VPS25-202ENST00000589219 SNRPGP15A8MWD9 76 aa8.78□□□□□ -1
VPS25-202ENST00000589219 DHHO43323 396 aa8.78□□□□□ -1
VPS25-202ENST00000589219 SSNA1O43805 119 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ALDOBP05062 364 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ENPP1P22413 925 aa8.78□□□□□ -1
VPS25-202ENST00000589219 GNALP38405 381 aa8.78□□□□□ -1
VPS25-202ENST00000589219 CASRP41180 1078 aa8.78□□□□□ -1
VPS25-202ENST00000589219 CYB561P49447 251 aa8.78□□□□□ -1
VPS25-202ENST00000589219 VEGFCP49767 419 aa8.78□□□□□ -1
VPS25-202ENST00000589219 GSK3AP49840 483 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ZNF121P58317 390 aaPredicted RBP8.78□□□□□ -1
VPS25-202ENST00000589219 B3GALT5-AS1P59052 145 aa8.78□□□□□ -1
VPS25-202ENST00000589219 TAS2R19P59542 299 aa8.78□□□□□ -1
VPS25-202ENST00000589219 RAC3P60763 192 aa8.78□□□□□ -1
VPS25-202ENST00000589219 RPS18P62269 152 aaKnown RBP8.78□□□□□ -1
VPS25-202ENST00000589219 RIPPLY1Q0D2K3 151 aa8.78□□□□□ -1
VPS25-202ENST00000589219 Q0VFX4 171 aa8.78□□□□□ -1
VPS25-202ENST00000589219 PLA2G7Q13093 441 aa8.78□□□□□ -1
VPS25-202ENST00000589219 FAM189A2Q15884 450 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ACER2Q5QJU3 275 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ABLIM2Q6H8Q1 611 aa8.78□□□□□ -1
VPS25-202ENST00000589219 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ZNF813Q6ZN06 617 aa8.78□□□□□ -1
VPS25-202ENST00000589219 TIPARPQ7Z3E1 657 aaKnown RBP8.78□□□□□ -1
VPS25-202ENST00000589219 OR2W3Q7Z3T1 314 aa8.78□□□□□ -1
VPS25-202ENST00000589219 FAM109AQ8N4B1 249 aa8.78□□□□□ -1
VPS25-202ENST00000589219 ZNF283Q8N7M2 679 aa8.78□□□□□ -1
VPS25-202ENST00000589219 TMEM229BQ8NBD8 167 aa8.78□□□□□ -1
VPS25-202ENST00000589219 GJC3Q8NFK1 279 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR11H7Q8NGC8 314 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR8B12Q8NGG6 310 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR51A2Q8NGJ7 313 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR4C16Q8NGL9 310 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR1J2Q8NGS2 313 aa8.78□□□□□ -1
VPS25-202ENST00000589219 OR14L1PQ8NHC6 308 aa8.78□□□□□ -1
VPS25-202ENST00000589219 FAM46BQ96A09 425 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms