RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SHBQ15464 509 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 OTPQ5XKR4 325 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 B3GNTL1Q67FW5 361 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 CORO6Q6QEF8 472 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 MUC20Q8N307 709 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 BPIFB2Q8N4F0 458 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 C12orf45Q8N5I9 185 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 CHST4Q8NCG5 386 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 ZBTB34Q8NCN2 500 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 NOXO1Q8NFA2 376 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 OR10G3Q8NGC4 313 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 SAP25Q8TEE9 199 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 WDR77Q9BQA1 342 aaPredicted RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 EMC6Q9BV81 110 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 POFUT1Q9H488 388 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 IFT46Q9NQC8 304 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 COMMD9Q9P000 198 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 PIPOXQ9P0Z9 390 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 KLHL13Q9P2N7 655 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 FARSAQ9Y285 508 aaKnown RBP6.57□□□□□ -1.36
ZNF540-206ENST00000589117 RP1P56715 2156 aa6.57□□□□□ -1.36
ZNF540-206ENST00000589117 SULT2B1O00204 365 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 LDLRAD4O15165 306 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 EIF1BO60739 113 aaKnown RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 VAMP5O95183 116 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 APOC1P02654 83 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TTRP02766 147 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CD74P04233 296 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 DCNP07585 359 aaKnown RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CD63P08962 238 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR4E1P0C645 316 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 PPP3CBP16298 524 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 M6PRP20645 277 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF93P35789 620 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ARPC4P59998 168 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CXADRP78310 365 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CDNFQ49AH0 187 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 SCGB2B2Q4G0G5 96 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TMED4Q7Z7H5 227 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 NAXDQ8IW45 347 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF101Q8IZC7 436 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ABCA7Q8IZY2 2146 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 BMPERQ8N8U9 685 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR2M3Q8NG83 312 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR4D10Q8NGI6 311 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR51A2Q8NGJ7 313 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 KCNG3Q8TAE7 436 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ELP5Q8TE02 316 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 DVL3Q92997 716 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 RASL10BQ96S79 203 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 NAA11Q9BSU3 229 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CNTD2Q9H8S5 307 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CA10Q9NS85 328 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FBLN5Q9UBX5 448 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 KCNN3Q9UGI6 736 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TP53BP1Q12888 1972 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FXYD6-FXYD2A0A087WZ82 144 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 A0A1W2PQM1 296 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 I3L521 148 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ARPC5O15511 151 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 DOK2O60496 412 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF354AO60765 605 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 MPC2O95563 127 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 CRYZL1O95825 349 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 UBBP0CG47 229 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 PGA4P0DJD7 388 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 PGA3P0DJD8 388 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 VSIG10L2P0DP72 767 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 RRASP10301 218 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FGF5P12034 268 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TRA2AQ13595 282 aaKnown RBP eCLIP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 KCNMB1Q16558 191 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF239Q16600 458 aaKnown RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 HLA-BQ31612 363 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM176BQ3YBM2 270 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 C1QTNF12Q5T7M4 302 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 AWAT2Q6E213 333 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ASPHD2Q6ICH7 369 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FAHD2BQ6P2I3 314 aaPredicted RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR2W3Q7Z3T1 314 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 TMPRSS9Q7Z410 1059 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 COMMD7Q86VX2 200 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ANGPTL5Q86XS5 388 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 PNLDC1Q8NA58 520 aaKnown RBP6.56□□□□□ -1.36
ZNF540-206ENST00000589117 AGBL5Q8NDL9 886 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR52B4Q8NGK2 314 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 OR5M1Q8NGP8 315 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 PPP1R35Q8TAP8 253 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 AQP3Q92482 292 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FAHD2AQ96GK7 314 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 SCGB3A2Q96PL1 93 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 GAL3ST1Q99999 423 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 ARL6Q9H0F7 186 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 SLC2A8Q9NY64 477 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 RDH8Q9NYR8 311 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 B3GAT1Q9P2W7 334 aa6.56□□□□□ -1.36
ZNF540-206ENST00000589117 A0A0D9SG52 128 aa6.55□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM235A6NFC5 223 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms