RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SYS1Q8N2H4 156 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 MRPL37Q9BZE1 423 aaKnown RBP16.8■□□□□ 0.28
CIRBP-220ENST00000588917 LIME1Q9H400 295 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 MOB1AQ9H8S9 216 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 CYSLTR2Q9NS75 346 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 ERVK13-1Q9NX77 482 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 CGGBP1Q9UFW8 167 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-220ENST00000588917 BLOC1S6Q9UL45 172 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 SNX5Q9Y5X3 404 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 R4GMQ9 66 aa16.8■□□□□ 0.28
CIRBP-220ENST00000588917 SPG11Q96JI7 2443 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 TMEM129A0AVI4 362 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 SLC1A7O00341 560 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 TBX1O43435 398 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 XPNPEP2O43895 674 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 CD8AP01732 235 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 CD53P19397 219 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 MST1LQ2TV78 715 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 SPATA46Q5T0L3 261 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 FAM57BQ71RH2 274 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 PGAP1Q75T13 922 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 SSX6Q7RTT6 188 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 PRSS45Q7RTY3 260 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 RFLNBQ8N5W9 214 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 CMBLQ96DG6 245 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 ALG8Q9BVK2 526 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 TTTY10Q9BZA0 68 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 BRD7Q9NPI1 651 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 PTTG3PQ9NZH4 202 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 GNG8Q9UK08 70 aa16.79■□□□□ 0.28
CIRBP-220ENST00000588917 CAB39Q9Y376 341 aaPredicted RBP16.79■□□□□ 0.28
CIRBP-220ENST00000588917 A0A1W2PPW3 197 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 PLSCR5A0PG75 271 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 PTGES3LE9PB15 166 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 LOC110117498-PIK3R3F6TDL0 507 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 J3QLW9 94 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 SLC2A1P11166 492 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 ZNF19P17023 458 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 KITLGP21583 273 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 PSG7Q13046 419 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 TIGD6Q17RP2 521 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 NKPD1Q17RQ9 610 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 SNAI3Q3KNW1 292 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 MRPL21Q7Z2W9 205 aaKnown RBP16.78■□□□□ 0.28
CIRBP-220ENST00000588917 LRP11Q86VZ4 500 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 IGFBPL1Q8WX77 278 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 TRMT61AQ96FX7 289 aaKnown RBP16.78■□□□□ 0.28
CIRBP-220ENST00000588917 SYT3Q9BQG1 590 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 REPIN1Q9BWE0 567 aaKnown RBP16.78■□□□□ 0.28
CIRBP-220ENST00000588917 YTHDF1Q9BYJ9 559 aaKnown RBP16.78■□□□□ 0.28
CIRBP-220ENST00000588917 BEX4Q9NWD9 120 aaPredicted RBP16.78■□□□□ 0.28
CIRBP-220ENST00000588917 FAM206AQ9NX38 181 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 TAAR3PQ9P1P4 343 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 FZR1Q9UM11 496 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 ZFHX3Q15911 3703 aa16.78■□□□□ 0.28
CIRBP-220ENST00000588917 A0A0U1RQV5 110 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 PRR32B1ATL7 298 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 M0R233 179 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 OVOL3O00110 214 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 MAGEB4O15481 346 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 RPP14O95059 124 aaKnown RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 CLPTM1O96005 669 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 ERCC1P07992 297 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 RPSAP08865 295 aaKnown RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 DDOSTP39656 456 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 GK2Q14410 553 aaPredicted RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 TP53I3Q53FA7 332 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 ZMAT1Q5H9K5 638 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 C11orf71Q6IPW1 123 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 AHSA2Q719I0 299 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 KLHL36Q8N4N3 616 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 NRGNQ92686 78 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 SPSB4Q96A44 273 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 SGK3Q96BR1 496 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 MBD6Q96DN6 1003 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 SIGLEC11Q96RL6 698 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 PBOV1Q9GZY1 135 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 DYNLRB1Q9NP97 96 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 FKBP14Q9NWM8 211 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 NUFIP1Q9UHK0 495 aaKnown RBP16.77■□□□□ 0.28
CIRBP-220ENST00000588917 OR52A1Q9UKL2 312 aa16.77■□□□□ 0.28
CIRBP-220ENST00000588917 NF1P21359 2839 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 MED13LQ71F56 2210 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 TIMM8AO60220 97 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-220ENST00000588917 LIMS3P0CW19 117 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 LIMS4P0CW20 117 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 MPV17P39210 176 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 PPOXP50336 477 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 GBX2P52951 348 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-220ENST00000588917 OR12D2P58182 307 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 HLXQ14774 488 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-220ENST00000588917 MSMPQ1L6U9 139 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 GLYATL3Q5SZD4 288 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 BCL2L15Q5TBC7 163 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 RNLSQ5VYX0 342 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF786Q8N393 782 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 REEP6Q96HR9 211 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 C4orf36Q96KX1 117 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF649Q9BS31 505 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 RAB1BQ9H0U4 201 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms