RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
NPC1-207ENST00000588867 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
NPC1-207ENST00000588867 IGHV1-18A0A0C4DH31 117 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 LOC107986453A0A1B0GWG9 222 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 GABARAPO95166 117 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 OCM2P0CE71 109 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 GRNP28799 593 aaKnown RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 TGFBR1P36897 503 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 TMEM91Q6ZNR0 172 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 GPR148Q8TDV2 347 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 ITLN2Q8WWU7 325 aaPredicted RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 C12orf43Q96C57 262 aaKnown RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 OR10A4Q9H209 315 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 GPR84Q9NQS5 396 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 CRNNQ9UBG3 495 aaPredicted RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 EIF3KQ9UBQ5 218 aaKnown RBP12.56□□□□□ -0.4
NPC1-207ENST00000588867 HHLA2Q9UM44 414 aa12.56□□□□□ -0.4
NPC1-207ENST00000588867 A0A1B0GVI7 797 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 SYT7O43581 403 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 CLDN14O95500 239 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 NGFP01138 241 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 IGLV1-44P01699 117 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ISG15P05161 165 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 PAX7P23759 505 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 NCS1P62166 190 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 CD200R1LQ6Q8B3 271 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ZNF808Q8N4W9 903 aaPredicted RBP12.55□□□□□ -0.4
NPC1-207ENST00000588867 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 OR2AE1Q8NHA4 323 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 APOBEC3DQ96AK3 386 aaPredicted RBP12.55□□□□□ -0.4
NPC1-207ENST00000588867 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 FAM71F1Q96KD3 344 aaPredicted RBP12.55□□□□□ -0.4
NPC1-207ENST00000588867 NPAP1Q9NZP6 1156 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 GSTK1Q9Y2Q3 226 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
NPC1-207ENST00000588867 ZNF879B4DU55 563 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 H3BMQ9 156 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ATE1O95260 518 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 FAM157BP0CG42 384 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 PPP3CBP16298 524 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ACHEP22303 614 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 WNT5AP41221 380 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 Q499Y3 187 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ZMAT1Q5H9K5 638 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 GDPGP1Q6ZNW5 385 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 ZNF101Q8IZC7 436 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 SOX7Q9BT81 388 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 DHDHQ9UQ10 334 aa12.55□□□□□ -0.4
NPC1-207ENST00000588867 A0A0U1RQV5 110 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 A0A1B0GTI1 187 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 THBDP07204 575 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 AGAP20933 346 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 GLYATL3Q5SZD4 288 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 C1QTNF12Q5T7M4 302 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 LINC01560Q8TB33 94 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 LYZL4Q96KX0 146 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 KCNS3Q9BQ31 491 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 NDRG3Q9UGV2 375 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 STARD10Q9Y365 291 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 SC5DO75845 299 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 GATBO75879 557 aaKnown RBP12.54□□□□□ -0.4
NPC1-207ENST00000588867 ZNF35P13682 527 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 GALP22466 123 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
NPC1-207ENST00000588867 MALLQ13021 153 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 TMEM106AQ96A25 262 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 ORAI1Q96D31 301 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 PPIL3Q9H2H8 161 aaKnown RBP12.54□□□□□ -0.4
NPC1-207ENST00000588867 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
NPC1-207ENST00000588867 ZNF462Q96JM2 2506 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 TRBV5-5A0A0J9YX44 114 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 ANKRD61A6NGH8 418 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 A6NIN4 97 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
NPC1-207ENST00000588867 XRCC2O43543 280 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 LMX1BO60663 402 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 CALRP27797 417 aaKnown RBP12.53□□□□□ -0.4
NPC1-207ENST00000588867 PRSS12P56730 875 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 NAAAQ02083 359 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 ZNF92Q03936 586 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 PAMR1Q6UXH9 720 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 UNQ9370/PRO34162Q6UXP9 181 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 DOK3Q7L591 496 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 BCL7BQ9BQE9 202 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
NPC1-207ENST00000588867 IGHV2OR16-5A0A0B4J2B6 119 aa12.52□□□□□ -0.4
NPC1-207ENST00000588867 TUBAL3A6NHL2 446 aa12.52□□□□□ -0.4
NPC1-207ENST00000588867 CRYAAP02489 173 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms