RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ZNF474Q6S9Z5 364 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 GALNT11Q8NCW6 608 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 OR5L1Q8NGL2 311 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 FGFBP3Q8TAT2 258 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 AKAP1Q92667 903 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■□□□ 12.1
NEDD4L-224ENST00000588712 TMEM106AQ96A25 262 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 APOBEC3DQ96AK3 386 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 TRMT61AQ96FX7 289 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 DACH2Q96NX9 599 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 DERL3Q96Q80 235 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 C1QTNF5Q9BXJ0 243 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 OPA3Q9H6K4 179 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 TUBG2Q9NRH3 451 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 EIF3KQ9UBQ5 218 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 FOXJ3Q9UPW0 622 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 MEGF11A6BM72 1044 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 EEF1E1-BLOC1S5C9J1V9 151 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 EEF1E1O43324 174 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 TBX1O43435 398 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 LCATP04180 440 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 PPP3CBP16298 524 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 CHRNB4P30926 498 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 RPS19P39019 145 aaKnown RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 ODF4Q2M2E3 257 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 SOWAHCQ53LP3 525 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 STAC2Q6ZMT1 411 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 MDP1Q86V88 176 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 COMMD2Q86X83 199 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 SERPINA12Q8IW75 414 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 OR8B12Q8NGG6 310 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 OR13C3Q8NGS6 347 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 SLC25A46Q96AG3 418 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 POM121L2Q96KW2 1035 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 MMP27Q9H306 513 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 ZNF275Q9NSD4 429 aaPredicted RBP9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 RHBDL2Q9NX52 303 aa9.2□□□□□ -0.94
NEDD4L-224ENST00000588712 TRBV5-7A0A0A0MS05 114 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 LOC107986453A0A1B0GWG9 222 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 C5orf49A4QMS7 147 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 C16orf97H3BN30 126 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 P2RY10O00398 339 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 IGKV3-15P01624 115 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 APEX1P27695 318 aaKnown RBP9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 PCSK6P29122 969 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ZNF404Q494X3 552 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 COLCA1Q6ZS62 124 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 PGAP1Q75T13 922 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 RDH10Q8IZV5 341 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 PLPP7Q8NBV4 271 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 SLC30A7Q8NEW0 376 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 OR5D14Q8NGL3 314 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 OR51E1Q8TCB6 317 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 RGP1Q92546 391 aaPredicted RBP9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 KCNS3Q9BQ31 491 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 MRI1Q9BV20 369 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 NEK6Q9HC98 313 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 NOX4Q9NPH5 578 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 GPR84Q9NQS5 396 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 CRNNQ9UBG3 495 aaPredicted RBP9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 LOC100509620A0A075B734 347 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 LRRTM2O43300 516 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ICMTO60725 284 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 CLPXO76031 633 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 IGLV3-1P01715 115 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ERCC1P07992 297 aaPredicted RBP9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 DBHP09172 617 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 SLC2A1P11166 492 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ZNF20P17024 532 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 FSTP19883 344 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 RAB3BP20337 219 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 PARP16Q8N5Y8 322 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 WDR31Q8NA23 367 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 SLC7A6Q92536 515 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ZNF75AQ96N20 296 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 TPK1Q9H3S4 243 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 RNF167Q9H6Y7 350 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 PLEKHA1Q9HB21 404 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 CDH20Q9HBT6 801 aa9.19□□□□□ -0.94
NEDD4L-224ENST00000588712 ATMQ13315 3056 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 POLEQ07864 2286 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 A0A075B6Q4 140 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 ANKRD61A6NGH8 418 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 DHRS3O75911 302 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 HNRNPCP07910 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 CCNOP22674 350 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 SOX2P48431 317 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 PPP3R1P63098 170 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 INSL4Q14641 139 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 Q6ZSR3 168 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 NAA40Q86UY6 237 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 OR13C5Q8NGS8 318 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 MCFD2Q8NI22 146 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 ACOT12Q8WYK0 555 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 PP6455Q8WZ26 134 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 PPP1R14AQ96A00 147 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 SGK3Q96BR1 496 aa9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 KCTD12Q96CX2 325 aaKnown RBP9.18□□□□□ -0.94
NEDD4L-224ENST00000588712 SHANK1Q9Y566 2161 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms