RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 F5H5K5 113 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 ARPC3O15145 178 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 GPR137BO60478 399 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 IGHV1-69P01742 117 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 CRYBA1P05813 215 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 LIPFP07098 398 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 PSKH1P11801 424 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 CA6P23280 308 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 OTX1P32242 354 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-204ENST00000588687 ECH1Q13011 328 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 PDCD1Q15116 288 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 SNAI3Q3KNW1 292 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 CD276Q5ZPR3 534 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 SFRP4Q6FHJ7 346 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-204ENST00000588687 PGAP1Q75T13 922 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 CYP4Z1Q86W10 505 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 SLCO4A1Q96BD0 722 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 ERMAPQ96PL5 475 aaPredicted RBP15.22■□□□□ 0.03
CCDC43-204ENST00000588687 CCT8L2Q96SF2 557 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 ADAT1Q9BUB4 502 aaKnown RBP15.22■□□□□ 0.03
CCDC43-204ENST00000588687 VIPAS39Q9H9C1 493 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 MRPL22Q9NWU5 206 aaKnown RBP15.22■□□□□ 0.03
CCDC43-204ENST00000588687 RNF7Q9UBF6 113 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 RNF114Q9Y508 228 aa15.22■□□□□ 0.03
CCDC43-204ENST00000588687 A0A0U1RQK1 487 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 CD300LBA8K4G0 201 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 C3orf80F5H4A9 247 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 TIMM23O14925 209 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 TSPAN15O95858 294 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 NCK1P16333 377 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 HIST1H1CP16403 213 aaKnown RBP15.21■□□□□ 0.03
CCDC43-204ENST00000588687 RHCEP18577 417 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 CENPAP49450 140 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 ZNF92Q03936 586 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 FAM90A1Q86YD7 464 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 PIP4P2Q8N4L2 257 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 GCSAMQ8N6F7 178 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 FANK1Q8TC84 345 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 PITX2Q99697 317 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 PKP2Q99959 881 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 OR52D1Q9H346 318 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 FN3KRPQ9HA64 309 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 RPRD1BQ9NQG5 326 aaKnown RBP15.21■□□□□ 0.03
CCDC43-204ENST00000588687 ERVK-18Q9QC07 812 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 ABCD2Q9UBJ2 740 aa15.21■□□□□ 0.03
CCDC43-204ENST00000588687 OR6C68A6NDL8 312 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 M0R135 149 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 ADAM20O43506 726 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 SASH3O75995 380 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 DIRAS1O95057 198 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 LCATP04180 440 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 IER3P46695 156 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 OR8G1Q15617 311 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 PLPP7Q8NBV4 271 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
CCDC43-204ENST00000588687 ZNF799Q96GE5 643 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 TRIM15Q9C019 465 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 SLC22A4Q9H015 551 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 FN3KQ9H479 309 aa15.2■□□□□ 0.02
CCDC43-204ENST00000588687 SRA1Q9HD15 236 aaKnown RBP15.2■□□□□ 0.02
CCDC43-204ENST00000588687 OOEPA6NGQ2 149 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 GSTA4O15217 222 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 LHBP01229 141 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 SEMG1P04279 462 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 MALLQ13021 153 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 KCNJ8Q15842 424 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 RFX4Q33E94 735 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 METTL11BQ5VVY1 283 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 TEX36Q5VZQ5 186 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 ZNF826PQ6ZT77 177 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 MRPL21Q7Z2W9 205 aaKnown RBP15.19■□□□□ 0.02
CCDC43-204ENST00000588687 HDXQ7Z353 690 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 FGFRL1Q8N441 504 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 PNLDC1Q8NA58 520 aaKnown RBP15.19■□□□□ 0.02
CCDC43-204ENST00000588687 OR4K13Q8NH42 304 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 OR2AE1Q8NHA4 323 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 SPRYD4Q8WW59 207 aaPredicted RBP15.19■□□□□ 0.02
CCDC43-204ENST00000588687 LHX4Q969G2 390 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 FAM162AQ96A26 154 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 HOPXQ9BPY8 73 aaPredicted RBP15.19■□□□□ 0.02
CCDC43-204ENST00000588687 RASSF4Q9H2L5 321 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 KIF17Q9P2E2 1029 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 KAAG1Q9UBP8 84 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 AURKCQ9UQB9 309 aa15.19■□□□□ 0.02
CCDC43-204ENST00000588687 A0A1B0GW55 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 SLC22A31A6NKX4 558 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 OR10H3O60404 316 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 GMDSO60547 372 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 GYPAP02724 150 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L2P0CJ85 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L3P0CJ86 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L4P0CJ87 422 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L5P0CJ88 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L6P0CJ89 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 DUX4L7P0CJ90 424 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 COX4I1P13073 169 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 OR8B8Q15620 311 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 TAF9Q16594 264 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 SLC36A3Q495N2 470 aa15.18■□□□□ 0.02
CCDC43-204ENST00000588687 GLYATL3Q5SZD4 288 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms